Cannabis sativa (hemp): 115713929
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Entry
115713929 CDS
T08987
Name
(RefSeq) transcription factor PIF1 isoform X2
KO
K16189
phytochrome-interacting factor
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115713929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115713929
Transcription factors [BR:
csav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115713929
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF5667
Motif
Other DBs
NCBI-GeneID:
115713929
NCBI-ProteinID:
XP_030498269
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Position
4:complement(80691113..80696441)
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AA seq
518 aa
AA seq
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MNHCVPDFEMDDDYSTHPNSSGHSRPPRKSFLPEDDIMELLWQNGQVVTQSQNQRSSSAM
RKLSPPFKYDAVPPADMESRLSQAQAHHNHLHLQEQQQHLFMQEDEMSSWLHHPLVEDPQ
FSADLFYPQLSETTTTTATNSTPPLPMRLSQFSEIRPPPPPPVSMACRPPIPPARTTENF
GHFSRLAKPSTVEFNPSCSKTAVDSCDTPAAVGPNLRSPEDTSFGNLGEGGEGKEIRCEV
TVISSPGDSSASAEPLLAAKTMAASDDRKRKGVEIDDAECQSEEVEFESGDGKKHARGAS
TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQM
MSMGCGMVPMMFPGMQQYMPPMGMGIGMGMGMGMEMGLNRPIMPFPNVLAGSPMSPPATA
AHLGPRFPMPAFHMPPVPTTEPPRGQATNQLDYMFQPFPTPQNPNQSRVPNFPDPYQQYF
GSQQMQLPLQQNPAMVQPSTSKPSTSRGPENPENHQSG
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcgtacccgatttcgaaatggatgatgattactcaactcatcccaattct
tccggacactctcgtcctcccagaaaatcttttcttccagaggacgatattatggagctt
ctatggcagaacggtcaggtagtcacacaaagccagaaccagagatcatcatcggcgatg
agaaaattatcgcctccgtttaaatacgatgctgtaccgcctgccgacatggaaagtagg
ttatcgcaagcacaagctcatcataatcatctacatctccaagaacagcaacagcatctt
tttatgcaggaagatgaaatgtcttcctggcttcatcatcctctcgttgaagatcctcaa
ttctccgccgacttgttttaccctcagctcagcgaaaccaccaccaccaccgccacgaac
tcaactcctcctcttcctatgcgccttagtcaattttccgagatcaggccaccaccgccg
ccgccggtttccatggcctgtaggccacctatacctccagctagaacgacggagaatttc
ggtcacttctctaggctcgctaaaccgtcgacggttgaattcaacccgtcctgttcgaaa
accgcggtggattcgtgcgatacgccggcggcggtcggtcccaatctgagaagccccgag
gatacatcgttcggtaatttaggtgaaggaggagaggggaaggagattcgatgcgaagtg
actgtaatttcatctccgggagactcgagcgccagcgcagaaccactactagcggcgaaa
acaatggcggcgagcgatgatcggaagagaaaaggagtggaaatagacgacgccgagtgt
cagagcgaggaagttgagtttgaatctggcgatggaaagaaacatgcacgtggggcatct
acaaaaagatctcgtgctgccgaggtccataatctctctgaaaggagacgtcgagatagg
ataaacgaaaagatgaaggctttgcaagaacttatacctcgttgtaacaagtctgacaaa
gcttcaatgctggatgaggcaatagaatacttgaaatctctacagctacaagtgcagatg
atgtcaatgggttgcggcatggtcccgatgatgtttcccggaatgcaacaatacatgcca
ccaatgggaatgggaatcggaatgggcatgggcatgggaatggaaatgggattgaaccga
cctattatgccctttccaaatgtgttagctggttcaccaatgtctccaccagctacagca
gctcatttgggaccaaggtttcctatgccagcctttcatatgccccctgtgcctacaact
gagccacccagaggtcaagcaactaaccagttagattatatgtttcagccatttcccaca
ccacaaaatccaaatcagtcacgggtgccaaattttcctgatccttaccaacagtatttt
ggttcacaacagatgcaattgccattacagcagaacccagcaatggtccaaccgagtacc
agcaaaccgagtactagtaggggacctgaaaatccagaaaatcatcaatcaggttga
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