Cannabis sativa (hemp): 115714581
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Entry
115714581 CDS
T08987
Name
(RefSeq) transcription factor PIF4
KO
K12126
phytochrome-interacting factor 3
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04075
Plant hormone signal transduction
csav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115714581
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
115714581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115714581
Transcription factors [BR:
csav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115714581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
New_glue
bHLH_LHW
bHLH_SAC51
AJAP1_PANP_C
MUCL1
Motif
Other DBs
NCBI-GeneID:
115714581
NCBI-ProteinID:
XP_030499216
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MDTSGFVELVWENDEIVKRRPCPSNFISSQRYSDNNTTEVPHVVVGGGGNKRAGNTATAV
PTRNVFELFSSPKQLPNKSNGACGRGDYDDDDDSDNHHRSKPRPVLLLNKDYLNNKSSER
DLQPPPERVLIMKNNNNKRVAVDDDNSMCLVPDNHQPHDQYDYHDYEDYPKNQEEAALVP
SLHSMGASNDYHNNGLPLLHTTTTATTTTTTTTTTTATTSNTSTTSTSLEQDQDQELQPL
PRKRSAKLHSLSERRRRDKINKRIRTLKALIPNCNKVDKASILEDAIDHLKSLQFQLQMM
MSMGTGLNNVMNPMMAQYLMSYFSPIMAMAMASSSSPLVGSRLGGVHQMYGFPFPQGVSS
SASQTSQSSPPIFTRPWHVSPSSSSSSPQIPPSFPLSYYYAPQNN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatactagtgggtttgtagaattggtatgggaaaatgatgagatcgtgaaacgacgt
ccgtgtccatcaaacttcatatcaagtcaaaggtatagtgataataacactactgaagtt
cctcatgttgttgttggtggtggtggtaataagagagcaggcaatactgctactgctgtt
cccacaaggaacgtgtttgagctattctcatcgccaaagcagttacctaataaatctaat
ggcgcctgtggccgtggtgactatgatgatgatgatgatagtgataatcatcatcgatct
aagcctaggccagtacttttacttaataaggactacttgaacaacaaatctagcgagcgg
gatctacaaccaccgccggaacgtgtactgataatgaagaataataataataagcgggta
gctgttgatgatgataattctatgtgcttggtccctgataatcatcaaccccatgatcaa
tacgactatcatgattatgaggactaccccaaaaaccaagaagaagctgcacttgttccc
tctttacattccatgggagcttcaaatgattatcataataatggattaccactacttcac
actactactacagctactactactactactactactactactacaactgctactacttct
aatacttctactacttctacttctcttgaacaagaccaagaccaagaactacaacctctc
ccaagaaaaagatctgcaaaacttcatagtttgtccgaaaggaggcgaagagataagatc
aacaagaggatacgcaccctaaaagccttaatacccaattgcaacaaggttgacaaagcc
tccatactcgaggatgccatagatcatctgaagtcacttcagtttcaattacagatgatg
atgtcgatgggaacgggacttaataatgtcatgaatccaatgatggcacaatatttgatg
agttatttctctccaataatggcaatggcaatggcatcatcatcatcaccgcttgttggt
tctcgattaggaggagtgcatcagatgtatgggttccccttcccccaaggtgtttcatct
tcagcttctcagacatcacagtcttcacctccaatattcacgaggccttggcatgtatca
ccctcttcttcttcttcttctcctcaaattccaccatcatttccattgtcctactactac
gcaccacaaaacaactaa
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