Cannabis sativa (hemp): 115715860
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Entry
115715860 CDS
T08987
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115715860
03400 DNA repair and recombination proteins [BR:
csav03400
]
115715860
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115715860
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115715860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
DivIC
DUF4200
Motif
Other DBs
NCBI-GeneID:
115715860
NCBI-ProteinID:
XP_060971266
LinkDB
All DBs
Position
5:4442648..4452078
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AA seq
1188 aa
AA seq
DB search
MFPQKGTKRQLFGTNDGSSNSLDEIYRFKVLLPNGTTVGLNLRESGSNMGVNDFINLVKD
EYSRLSESMQHKRCMNWDSAGSLSLHDANDAKIKGVVDFKNFKPHKCHILILHDGSGKAV
QTFENMWDLTPDTDILREVPESYTFESALADLIDNSLQAVWANSNNDRKLVSVDLLEDRI
SVFDSGIGMDGSDENSLAKWYVLPMSFPAFRVHLNLSVLTSALLYRGKMGASLNRSEKEQ
AIGGNPPYLMPYFGMFGYGGSFASMHLGRHALVSSKTKNSRKVYTLRLAREALLRRSGLE
WTTSGGLRDPSEDELTKTKHGSFTKVEIFEPKIKPSNILQLQCKLKDIYFPYIQCDELSN
SRKTITPIEFQVNGTNLTEIEGGEVAITNLHSCNGPDFVLQLRLSFNQDNVTKSQVVSGS
RLNHEANVRLKCVYFPVVGGKENIEKILEKLKDAGHEVSENFRTFKRVSIRRLGRLIPDA
RWDWMPFMDLRQKKGTDRAHILKRCCFRVKCFIDTDAGINPTPSKHDLAPHSPFTTALRN
FGNILYENEKGIEIRVYRDGKPLKNSQLERDYQNWILQMHNKYDEEVDHGEDEPILALIT
SPSKGKAIRKSNDVSRVHQVLKRNEITWKAGQHVKILKGACAGVHKNNVYATIQYFILGG
LQGDTGGEVQIICRPLGTPEDDGCIISEVNGMMTLDMKRSLSLPISVIDSKKCLPVETAE
WNNQMDKQLQKNKTVDLYKSSIVKPARQNSKQEHDGMEFSMFIKNYKKVFEDDLLKFGSE
IQILEDKYHQLNEEKEKIEETIKDLQGFDLLAQLWFLFFITFWYIKIVLIEYLSRSCVCC
EFLDSTELYPSGFVNQFSTKEEVIESIVKMGNSVAAAVLCSISKEDPFQEKENDLMKDII
GVVALLGRVRSSQLSRILAEYLGSDQMLAVVARSFETAILLEKHKQTGDVNCSHVNHEKA
PLLGQSINGRFIVICFDNISPFRGSLKSGSQRKLDLQRPYLNDGTIPKGFLGFAVNMIDF
DADQLSIKNSSGNGLRETVFYHLLGELHLYRTLEDMLAARACIKQGAISLDGGILRGDSV
ISFGSRCVSLFMSFSSSLVGMFFVEMIGFSMIVLSDPGVCFQVVQTINEMPSSQENLKQL
KEKKSELRTINDEIEVEKGKLNKVLDKFHERKAEFNKFMKLVESPYKL
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtttccccagaaaggaacaaaaaggcaattgtttggaaccaatgatggaagtagtaac
agtttagacgaaatatacagatttaaagttcttttacccaatggaacaaccgttggattg
aatttgagagagtctggttctaacatgggtgttaatgactttattaatttggtgaaagat
gaatattctcgactgtcggaatcaatgcaacataaaagatgtatgaactgggattctgct
ggttctttatctcttcatgatgccaatgatgccaagataaaaggggttgtggatttcaag
aattttaagccacataagtgccacattttaatactccatgatggttctggcaaagctgtt
caaacttttgagaatatgtgggatttgactcctgatactgacattttaagggaggtacct
gaatcctacacatttgagtctgctcttgcggatttaattgacaattctctgcaggcagta
tgggctaacagtaacaacgatcgaaaacttgttagtgtggatcttttagaggatagaatt
tcagtctttgacagtggtataggaatggatggcagcgatgaaaattctctggcgaaatgg
tacgtgctaccaatgtcctttccagcatttcgtgtgcatttgaatttaagtgtcttaact
agtgctctactatataggggtaaaatgggtgcctcgcttaaccggtcagagaaagaacag
gctattgggggcaatcctccatatctaatgccttattttggcatgtttgggtatggagga
tcgtttgcctccatgcatttagggagacatgctttagtgtcttcgaagacaaagaattca
aggaaggtatatactttacgtcttgctagagaggctttgctcaggcgctctggacttgaa
tggacgacttctggagggcttagggatccttcagaggatgagcttacaaaaacaaaacat
ggaagctttactaaggttgaaatctttgaaccaaagataaagccttcaaatatattacaa
cttcagtgcaaactgaaggacatatacttcccttatattcagtgtgatgagttgtccaac
tcaaggaagacaataacacctatagaatttcaggttaatggtactaatttgactgagatt
gagggtggagaagttgctattacaaacttgcattcttgcaatggtcctgattttgtttta
caacttcgtttgtccttcaaccaagacaatgtaaccaagagtcaagttgtgtcaggttcg
cggttgaatcacgaggccaatgtgcggctgaaatgtgtttattttccagttgttggggga
aaagagaacattgagaagattttggaaaagttaaaagatgcaggacatgaagtctctgaa
aattttagaacctttaaacgagtttctattagaaggcttggtcgattaattccagatgct
cgatgggattggatgcctttcatggacttaaggcaaaaaaagggaactgatagggcacac
atattgaagagatgttgtttcagagtgaaatgctttattgatactgatgctggtatcaat
cccactccgtcgaagcatgatcttgcacctcacagtccttttaccactgcactaaggaat
ttcggaaatattctttatgagaatgaaaaagggatagaaatcagagtttatagagatggg
aagccattgaaaaattcgcaactagagagggattatcaaaattggattctccagatgcac
aataagtatgatgaagaagttgatcacggtgaagacgaacctatacttgcacttatcaca
agcccatcaaaaggaaaggcaatcagaaaatcaaatgatgtttcaagggttcaccaagtt
cttaagaggaatgaaataacatggaaagctggccaacatgttaagattttgaagggagca
tgtgctggtgttcataaaaataatgtctatgcaactatacaatattttatacttggaggc
ttacaaggagatacaggaggcgaagttcagattatttgcaggccacttggtacaccagag
gatgatggttgcataatttcagaagttaatgggatgatgactcttgatatgaaacgctcc
ttgtctttacctatcagcgtaatcgattccaaaaagtgcttacctgttgaaactgctgaa
tggaataaccaaatggataagcagcttcagaaaaataaaaccgtagatctttacaaatct
tcgattgtcaaacctgcaaggcaaaattcaaaacaggagcatgatggaatggaattttcc
atgttcatcaagaattataaaaaggtctttgaagatgaccttttaaaatttggttcagaa
atccaaatattggaagataaatatcatcagttaaatgaagagaaagaaaagattgaagaa
actataaaagacttacaaggttttgacttgctagcacagctatggtttctattctttatc
acattttggtatattaagattgtgttaattgaatacttatcaagatcttgtgtttgttgt
gaatttttagattctactgaactatatccatcgggtttcgtgaatcagttctccacgaaa
gaagaagtgatagagagtatagtaaagatgggcaactctgttgctgctgcagttctttgc
agcatatctaaggaagatccatttcaagagaaagagaatgatttaatgaaggacataata
ggagtggttgctctactcggaagagttcgttctagtcagctgagcaggattttggcagaa
tacttgggttctgatcaaatgctagctgttgtagctagatctttcgaaactgctattctt
cttgaaaaacataaacaaactggagatgttaattgcagccatgttaatcatgaaaaagct
cctcttcttggccaatctataaatggtcgatttattgttatatgctttgacaatataagt
ccatttagaggtagcttgaagagtggttctcagaggaagctggatttacaacgcccttat
ttgaacgatggaactattccaaaaggttttctcggatttgctgtgaatatgattgatttt
gatgcagaccaactatccattaagaatagttcaggcaatggtcttagagagactgtattt
tatcaccttcttggtgaactccatctttacagaaccttggaggacatgctagctgctcgt
gcttgtataaaacaaggcgctatatcgcttgatggtggaatattgagaggagacagtgtg
atatcttttggatctaggtgtgtttctctattcatgtctttttcatcctcacttgtggga
atgttttttgttgaaatgattggtttttctatgattgttcttagtgatcctggagtgtgc
tttcaagttgtgcaaacaatcaatgaaatgccaagttctcaagaaaatttgaaacagctt
aaagagaagaaatctgagttgagaacaatcaatgatgagatagaagtagagaagggaaaa
ctcaacaaagttttagacaagtttcatgagagaaaagcagagtttaacaagtttatgaag
ttagtggaatctccatacaaactatga
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integrated database retrieval system
