Clostridium saccharobutylicum: CLSA_c16340
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Entry
CLSA_c16340 CDS
T02876
Symbol
vanS1
Name
(GenBank) sensor protein VanS
KO
K18350
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb01502
Vancomycin resistance
csb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLSA_c16340 (vanS1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLSA_c16340 (vanS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csb01001
]
CLSA_c16340 (vanS1)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csb02022
]
CLSA_c16340 (vanS1)
01504 Antimicrobial resistance genes [BR:
csb01504
]
CLSA_c16340 (vanS1)
Enzymes [BR:
csb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CLSA_c16340 (vanS1)
Protein kinases [BR:
csb01001
]
Histidine kinases
OmpR family
CLSA_c16340 (vanS1)
Two-component system [BR:
csb02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CLSA_c16340 (vanS1)
Antimicrobial resistance genes [BR:
csb01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CLSA_c16340 (vanS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
CovS-like_HAMP
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
AGX42632
UniProt:
U5MT55
LinkDB
All DBs
Position
1824309..1825379
Genome browser
AA seq
356 aa
AA seq
DB search
MKKKIINKVGIKLLILIPIDMIISFSIFWFICIMTAKKFGNNIELYQKYGAFLVMGSFVL
ELVIFLIAINGRIKYLKYISKSVTNIKTQQYLNHIEIKGNDEISQLAEDINTMSERLKEN
YEKEKRQEETKNELIVAVSHDLKTPLTSIIGYLELLNKDKETFSKEQQEFLKVAYEKSEN
LKKLIEELFEYTKLSNDYVKLDKVPFNIAVLVNQIVGEHVLFLSEKNIKVEIECNENELL
CEIDIQKFIRVIENLVKNVEKYSYRNSTFKIRMWEEDKNIKLSFINEGDNISKDDLLKIF
DEMYRIDKSRNVEIEGSGLGLAISKKIIELHEGRIWAECNKNKINFNIELPKVSEE
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaaataattaataaggtaggaataaagttattaatattaattcctatagat
atgataataagtttctcgattttttggtttatttgtattatgactgctaaaaaatttggc
aacaatattgagctttatcagaaatatggagcttttctagttatgggaagttttgtattg
gagttagtaatttttttgattgcgattaatggaaggattaaatatttaaagtatattagt
aaaagtgtcactaatataaagacacagcaatatttaaatcatatagagataaaaggcaat
gatgagatttcgcagttagctgaagatataaatacaatgtctgagagacttaaagaaaat
tatgaaaaagaaaaaagacaggaagaaactaaaaacgagttgattgttgctgtttcacat
gacttaaaaactccattaacatctataattggatatttggaacttcttaataaggataaa
gaaactttttcaaaagagcagcaagagtttttaaaagtagcctatgaaaaaagtgagaat
ttaaagaaattaattgaggaactttttgaatatactaaactttcaaatgactatgtgaaa
ctagataaagttccatttaatatagctgttttagtaaatcaaatagtgggagagcatgtt
ttatttttatctgaaaagaatattaaggttgaaattgaatgtaatgaaaatgaattgctt
tgtgagattgatatacaaaagtttattagagttattgaaaatttagtgaaaaatgttgaa
aagtatagttatagaaactctacatttaaaattagaatgtgggaagaggataagaatatt
aaactttcgtttattaatgaaggtgataatattagtaaagacgatttgcttaaaatattc
gatgaaatgtatagaattgacaaatcaagaaatgttgaaattgaagggtctggccttggt
cttgctatttcaaagaaaatcatagaacttcatgagggaagaatttgggcagaatgtaat
aagaataaaattaattttaatattgaattacccaaagtaagcgaagaataa
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