Clostridium saccharobutylicum: CLSA_c16380
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Entry
CLSA_c16380 CDS
T02876
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csb
Clostridium saccharobutylicum
Pathway
csb01501
beta-Lactam resistance
csb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLSA_c16380
01503 Cationic antimicrobial peptide (CAMP) resistance
CLSA_c16380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csb03036
]
CLSA_c16380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csb02000
]
CLSA_c16380
01504 Antimicrobial resistance genes [BR:
csb01504
]
CLSA_c16380
Chromosome and associated proteins [BR:
csb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CLSA_c16380
Transporters [BR:
csb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CLSA_c16380
Antimicrobial resistance genes [BR:
csb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CLSA_c16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_3
HlyD_D23
Biotin_lipoyl
DUF7584
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AGX42636
UniProt:
U5MSK0
LinkDB
All DBs
Position
1829233..1830444
Genome browser
AA seq
403 aa
AA seq
DB search
MNKRILVTCLVFLNLFILSGCSSESDSKADVKTYPVKTIELQDKSYPVSLEYEGLTGGSE
VKKLSFKSAAKVAKIYVSKGQHVKKGDNLVDLDKSDLNFAMDAAKAQMDSASAQYNKAVN
GAQTEDINKAQIAVKNAQDNYNYCKDLYDKNVTLYQAKAIPKQQLDDAKIKLDDSESALN
SANETLTQLQNGTREEDKQAALAALNTTKANYDSKVNLVEDASLKAPEDGYVVDILCKEN
EMQAAGYPVILFRNENQVVTVGLSDDDVKKVQIGEKAKIKIDDDTVDGEIMNIVQSADTQ
SGTYSAEIKITNQIDNNKFYIGQSVKVYIDDGEKNGIWIPISSILNDGQDYVYAVEDSRA
VRKNITIGQTNEDQVCVEGLEVGDNLVNEGMKNIKAGYQVSVE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagaatattagttacttgtttagtatttttaaatttatttatattaagtgga
tgcagtagtgagtctgattcaaaagcagatgtaaaaacttatccagtaaaaactatagaa
ttacaagataaaagctatcctgtttcattagaatatgaaggtttaacaggggggagtgaa
gtgaaaaaactttcttttaaaagtgcagctaaagttgcaaaaatatatgtttcaaagggt
cagcatgtaaaaaaaggagataatcttgttgatttagataaatcagatttgaattttgca
atggatgcagcaaaagctcaaatggactcagcttcagcacaatataataaagctgtaaat
ggtgctcaaactgaggatataaataaagctcagatagcagtaaaaaatgctcaggataat
tataattattgcaaggatttatatgataaaaatgttactttatatcaggcaaaggcaatt
ccaaaacaacagcttgacgatgctaagataaaactagatgacagtgagagtgctctaaat
agtgcaaatgaaactttaacacaacttcaaaatggaacaagagaagaagataaacaagca
gcattagcagcattaaatactacaaaagctaattatgattctaaagttaatctggttgaa
gatgcttctcttaaagcaccagaagatggttatgtagtagatattctttgtaaagaaaat
gaaatgcaagcggctggttatccagttatattgtttagaaatgaaaatcaagttgtaaca
gtaggattatctgacgatgatgtcaaaaaagtacaaataggagagaaagctaaaattaaa
atagatgatgataccgttgatggagaaattatgaatatagttcaatcagctgatactcaa
agtggaacatatagtgcagaaattaagattaccaatcaaatagataataataaattttat
ataggtcaatcagtaaaagtttatattgacgatggtgaaaagaatggaatatggattcct
attagcagtattttaaatgatgggcaagattacgtctatgcagtggaagatagtcgtgct
gtaaggaaaaacataacaattggacaaaccaatgaagatcaagtgtgtgtagagggacta
gaggttggagataatcttgtaaatgaaggtatgaaaaatataaaagctggatatcaggtt
tcagtagaataa
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