Clostridium saccharobutylicum: CLSA_c40520
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Entry
CLSA_c40520 CDS
T02876
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
csb
Clostridium saccharobutylicum
Pathway
csb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLSA_c40520 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csb03400
]
CLSA_c40520 (nth)
Enzymes [BR:
csb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CLSA_c40520 (nth)
DNA repair and recombination proteins [BR:
csb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLSA_c40520 (nth)
Prokaryotic type
CLSA_c40520 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
AGX45012
UniProt:
U5MZS7
LinkDB
All DBs
Position
complement(4484411..4485040)
Genome browser
AA seq
209 aa
AA seq
DB search
MKARTKKIIEILKETYPDAKCELNYKTPLQLLVATILSAQTTDKKVNEVTESLFKDYPDL
DAFLTLANDELEERIRQIGLYRNKSKNLILMFRQLKEKFNGEVPQTMEGITSLAGAGRKT
ANVVLSNAFGVPSIAVDTHVFRVSNRLDLANSDNVLEVEKQLQKEIPKKEWTLMHHLLIF
HGRRCCIARKPKCKECPLSDVCKYDNKIY
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaggacgaagaaaatcatagagattttaaaagaaacgtatcctgatgcaaag
tgtgagttgaattataaaacaccgcttcaattacttgttgccacaatactatcagctcaa
acaactgataaaaaagtaaatgaagttacagaaagcttatttaaagattatccagattta
gatgcatttttaacattggctaacgacgaacttgaagaaagaataaggcagataggatta
tatagaaataaatctaaaaatttaatacttatgtttagacaattaaaagaaaaatttaat
ggagaagttccacagactatggaaggaataacttcactagcaggagcaggaagaaaaaca
gcaaatgtggttttgtcaaatgcttttggagtaccatctattgcagtagatacacatgta
ttcagagtttctaatagattagatttagctaattcagataatgttttagaagttgaaaaa
caattacaaaaagaaattcctaaaaaggaatggacgttaatgcatcatcttttaattttt
catggaagaagatgttgtattgcgagaaaaccaaaatgtaaagaatgtccattaagtgat
gtatgtaagtatgacaataaaatatattaa
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