Clostridium scindens: HDCHBGLK_00151
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Entry
HDCHBGLK_00151 CDS
T06591
Symbol
dmdB
Name
(GenBank) 2,3-dimethylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
csci
Clostridium scindens
Pathway
csci00290
Valine, leucine and isoleucine biosynthesis
csci00660
C5-Branched dibasic acid metabolism
csci01100
Metabolic pathways
csci01110
Biosynthesis of secondary metabolites
csci01210
2-Oxocarboxylic acid metabolism
csci01230
Biosynthesis of amino acids
Module
csci_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
HDCHBGLK_00151 (dmdB)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
HDCHBGLK_00151 (dmdB)
Enzymes [BR:
csci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
HDCHBGLK_00151 (dmdB)
4.2.1.35 (R)-2-methylmalate dehydratase
HDCHBGLK_00151 (dmdB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Aconitase_2_N
MoeA_C
Motif
Other DBs
NCBI-ProteinID:
QBF72806
UniProt:
B0NJ75
LinkDB
All DBs
Position
complement(161741..162235)
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AA seq
164 aa
AA seq
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MKASGKVFKYGDNVDTDVIIPARYLNSFDGKELATHAMVDIDPEFAGKVQPGDMIVARKN
FGCGSSREHAPLCLREAGVSCVIAETFARIFFRNAINIGLPIIECPEAAEGIEAGDEVEV
DFDSGIIYNKTKDAQYKGQPFPEFMQNLIAAGGLVNYTNSKKKG
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcatcaggaaaagtatttaaatatggagacaatgtagacactgacgtaattatt
ccagccaggtatctgaattcttttgacggaaaagaacttgctacccatgctatggttgat
attgatccggagtttgccgggaaggtacagccgggagacatgatcgtggcgagaaagaac
tttggctgcggctcatccagagaacatgcgcctctctgcctgagagaggcaggggttagt
tgtgtgatcgctgagacattcgcgcgcatctttttcaggaatgccattaatataggcctg
ccgatcatcgagtgtccggaggcggcagaagggattgaagccggcgacgaagtggaagtg
gattttgacagcggaatcatctataacaagacaaaggacgcgcagtataaaggacagcca
tttccggaattcatgcagaatctgattgcggccggcggtctggtgaattacactaacagt
aagaaaaaaggatag
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