Clostridium scindens: HDCHBGLK_00945
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Entry
HDCHBGLK_00945 CDS
T06591
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
csci
Clostridium scindens
Pathway
csci00270
Cysteine and methionine metabolism
csci00450
Selenocompound metabolism
csci01100
Metabolic pathways
csci01110
Biosynthesis of secondary metabolites
csci01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
csci00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HDCHBGLK_00945 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HDCHBGLK_00945 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csci01007
]
HDCHBGLK_00945 (patB)
Enzymes [BR:
csci01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
HDCHBGLK_00945 (patB)
Amino acid related enzymes [BR:
csci01007
]
Aminotransferase (transaminase)
Class II
HDCHBGLK_00945 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
TIR
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QBF73571
UniProt:
A0A494WN43
LinkDB
All DBs
Position
911727..912941
Genome browser
AA seq
404 aa
AA seq
DB search
MKYDFTTIINRQGKDAMAVDAPGKFPSFPLPEDGFDFIPMWVADMNFATAPTVQSSIAER
LTHPLYGYFITRDEYYQSIINWHETRHQVTGLRKECIGYENGVLGGLLSALNAFASPGDS
VLVHSPTYIGFTGSIGGAGYKIVHSELKRDEEGIWRMDYKDMDEKIKKHKIHVAVFCNPH
NPTGRVWTLEELEKAMKVYQDNDCVVISDEIWSDIILNGNHHIPLQSISEDARKRTIALY
APSKTFNLAGLIGSYHIIFDSYLRDRVRACSSKSHYNSMNVLSMYALMGAYKPEGMEWVD
ELCEVLSNNVNYAYNFINTHFEGISLSKPQGTYMLFLDCTDWCEKTGKTVDKLLKAGYRV
GVGWQDGRPFHGKNAIRMNLALPFSKVQEAFDRLERYVFNSVIE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgattttacgactattattaatcgacagggaaaggatgcaatggcagtggat
gcaccaggtaaatttccgagttttcctcttccggaggacggctttgattttattcctatg
tgggtcgcggatatgaacttcgcgacagctcctacagtacagtcttctattgctgaaaga
ctgacacatccactgtatggttattttattacaagagacgagtattaccagtcaatcatt
aactggcacgaaacaaggcatcaggtgactggacttagaaaggaatgcataggatatgaa
aatggcgttctgggcggcctgctctctgctctcaatgcatttgccagtcctggggatagc
gttcttgtgcatagcccaacttacatcgggtttacaggaagtattggcggtgccggttat
aagattgtccacagtgaactgaaaagggatgaagaaggaatctggagaatggattataaa
gatatggatgaaaaaattaagaagcataagattcatgtagccgtcttctgtaatccgcat
aacccaactggaagagtctggacgcttgaagaactggaaaaagcgatgaaggtgtatcag
gataatgattgtgttgttatatctgatgaaatctggtctgatatcatattgaatggaaat
catcatattccacttcaatctatcagcgaagatgcaaggaaacgaaccattgcgctttat
gcacctagcaagacatttaatctggccggtttgattggaagttatcatataattttcgat
tcgtatctgcgcgatcgtgttagagcctgcagcagtaaatctcattataattctatgaac
gtgttgtctatgtatgcgttaatgggagcatacaagccagaaggaatggagtgggttgat
gagttgtgtgaagtattatcaaataatgtcaattatgcatataattttattaacacacat
tttgaagggatatcactttctaagccacaggggacatatatgttattccttgattgtacc
gactggtgtgaaaaaaccgggaaaacggttgacaagctattgaaggcaggataccgtgtg
ggtgttggctggcaggatggcagaccgtttcatgggaaaaatgcaattcgaatgaacctt
gcacttcctttttcgaaagttcaggaagcgtttgacagattggagcgatacgtttttaat
agtgtaattgaatag
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