Chryseobacterium scophthalmum: ACLB9Y_01850
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Entry
ACLB9Y_01850 CDS
T11109
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csco Chryseobacterium scophthalmum
Pathway
csco01501
beta-Lactam resistance
csco01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACLB9Y_01850
01503 Cationic antimicrobial peptide (CAMP) resistance
ACLB9Y_01850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csco03036
]
ACLB9Y_01850
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csco02000
]
ACLB9Y_01850
01504 Antimicrobial resistance genes [BR:
csco01504
]
ACLB9Y_01850
Chromosome and associated proteins [BR:
csco03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
ACLB9Y_01850
Transporters [BR:
csco02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACLB9Y_01850
Antimicrobial resistance genes [BR:
csco01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ACLB9Y_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
YknX_C
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
HH_EMRA
BSH_YknX
BSH_CzcB
BSH_YhbJ
Beta-barrel_RND_2
HH_CzcB
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
XMO02373
LinkDB
All DBs
Position
complement(435289..436449)
Genome browser
AA seq
386 aa
AA seq
DB search
MKTTAKAKLIVLISSIILLQNCTKAAEGTNAAPPAPELPVYTVTTSPATIYQEFPTALEG
KNNVEIRSQVDGYLDKIYVEEGAYVRAGQPLFKIDSRAYGEQMNMANANLQVANANIQKA
KVEVDRLEPLVSAKVVSEVQLRTAKANYAAAVAAASQAKASVGGAKINVGFTTITAPVSG
YIGRIPYKKGSLISRTDANPLTLLSDISEIYAYFSLSELDFIGFQKKYSGATLNEKLKNM
PMVDLVIADNTTYPEKGKMSIVDGQFDRTTGAISVRAVFPNANGALRTGNTGRIRMPQLF
ANTLVIPQESTFEIQDKTYVYIVGKDKKVTSKPITISGKTDSYYFISEGLAAGEKIVYVG
LGSLKDGVSIKSKNISSDSLLKARPL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaactgcaaaagcaaaattaatcgtacttatatcgagtatcattcttttacaa
aattgcacaaaagcggcagaaggcactaatgccgctccacccgctccagaattgccagtt
tataccgttactacatctccagcaacaatatatcaggaatttccaaccgcattagaagga
aaaaataatgtggaaataagatctcaggttgacggatatttagataaaatttatgtagaa
gaaggtgcttatgtaagagctggacaacctttatttaaaatagattcaagagcttacgga
gagcagatgaatatggccaatgctaacttacaggttgctaatgccaatattcagaaagca
aaagttgaggttgacagactggagcctcttgtatctgcaaaagtagtttctgaagtacag
ttgagaacagcaaaagcaaattacgccgcagccgttgcagcagcttcacaagcaaaagct
tcagttggcggagcaaagatcaatgtaggatttacaacgattacagctcctgtaagcggt
tacattggaagaattccttataaaaaaggaagtttaatttcaagaacagatgctaatccg
ttgactttattatcagacatcagtgaaatttatgcgtacttctctttaagcgaacttgat
tttatcggttttcagaaaaaatattcaggagcaactttaaatgaaaaacttaaaaatatg
ccgatggtagatttggtaattgccgacaacactacatatcctgaaaaaggtaaaatgagc
attgttgacggacagtttgacagaactacaggagcgatcagtgttcgtgccgtttttcca
aatgcgaacggagctttgagaacaggaaatacaggtagaattcgtatgccacaattattc
gccaatacgcttgttattcctcaggaatcaactttcgaaatacaggataaaacctatgtt
tatattgttggaaaagataaaaaagtaaccagcaagcctataacgatttctggaaaaaca
gacagttattattttatttccgaaggacttgcagcaggtgaaaaaatagtttatgttggt
ttaggtagcttaaaggacggcgtttccatcaaatccaaaaacatttcttctgatagtctt
ttgaaagcaagaccattataa
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