Cryptotermes secundus (drywood termite): 111872023
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Entry
111872023 CDS
T07421
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111872023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csec03400
]
111872023
Enzymes [BR:
csec01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
111872023
DNA repair and recombination proteins [BR:
csec03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111872023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
BRCT_2
RNA_ligase
DNA_ligase_IV
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
111872023
NCBI-ProteinID:
XP_023721271
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MESTVASKIPFKDLCLLCEKISSSARSMKGAYLRKYISYFREYAKKMKQETPSLDDSFYP
ILRLLLPQLDRERGAYGVKEHNLAKVYIRILGLPKEGHDASKLLNFRAPKTAGKLAGDFA
EVAFWVLKSRCPEGGSLNVEQVNMHLNKIVLKHAAHDPRGVDAELVAMLTSMSAAEQKWL
IRMLLKDMKFGLGQNSIFGIYHPDAKELYDVCNNLHKVCQLLHNPTVRLHEVEVSLFSPF
RPMLAERCNVRSVEESMKKSQFYYVETKHDGERFQLHMENGVFKYFSRNGYEYTDGFATL
LTPHVAKLLRTDIKSCILDGEMMGWNQKLKCFKTKGIDFDVKYLKMGDDIRPCLCVFDIL
LCNGQVLTNKPLCERLHFLESLFTPSEGIIMYTEQKKVTTGQEVMDELNLAIDKRLEGII
LKDPTSVYKPNARKGGWYKIKPEYTEGLMDHVDLIIMGGYFGEGRRKGISHFLLGAAVPP
ATEGMEPVEFHSVVRVGSGYSMYELSELLQKLSPHWQRVLPGQCPPCLAWTKEKPDVWIA
PQNSYILEVKATEIVPSKSFKVNFTLRFPRVETIRYDKKWSDCMTLTEFDSLRKEASGKL
YSRHVDASNELPESPRKKQRHLTRVPIKLGEQFRGIDISGIDVVTDLLEGKEFCVLTDWK
EHTKQDIETKIVQNGGTVVQNTGHNTFCAVAGNTTLRVHNIAKSGRYSVVHVDWLLRSIA
AGELLPWTPADLLYATSTVSEQLSAKYDMFGDSYTQPLNKDTLKYVFEQVEKMDSVVDLT
EEMLADLEIELFPGPSPYGLFRLCRAYVDKYYRLNDPLSGESNKLDIVEVYFSFYGGQTF
LQIDELTTHVIVHSESQERLDEIKGLNEERGCRFYIVTENWVHETIKMKSRQNEHDYSL
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggaatctactgttgcttctaaaatacccttcaaggatttatgtcttctctgtgagaaa
attagtagcagtgcacgttccatgaagggagcatacctcagaaagtacatcagctacttc
cgtgaatatgccaagaagatgaaacaggaaacaccatcattggatgacagtttctatccc
atcctacgactactactgccacagctagaccgagaacgtggtgcttatggtgtaaaggag
cacaacttagctaaagtttacatccgtatccttggtctgcctaaggaaggacatgatgca
tcaaaactactcaattttagggctccaaaaactgcaggcaaacttgctggtgactttgca
gaggtggctttctgggttctgaaaagtcgttgtcctgaaggggggagtctgaatgtggag
caagtgaacatgcatctcaataagatcgtactgaaacatgcagctcatgatccaagaggg
gttgatgctgagcttgttgcaatgttgacgtcaatgtctgcagcagaacagaaatggttg
atacggatgttgttaaaggacatgaaatttggcttgggccagaatagtatttttggcata
tatcatccagatgccaaggagctgtatgatgtttgtaacaaccttcataaggtttgccag
ttgttacacaatcccacagttcgtttgcatgaagtggaagtttcattattctctccattt
cgaccaatgctggcagaacgttgtaatgtgcgctctgtagaagaatccatgaagaaaagc
cagttttattatgtagaaactaaacatgatggtgaaaggtttcagttgcacatggagaat
ggagttttcaaatatttctccagaaatggttatgaatacacagatggttttgccacactt
ctgacaccccatgtggcaaaactactgcgaactgatataaagagctgcatactggatgga
gaaatgatgggatggaatcaaaagttgaagtgttttaaaactaaaggtattgattttgat
gtgaagtacctgaagatgggagatgacattcgcccatgtctgtgtgtgtttgatatattg
ctgtgtaatgggcaagtacttaccaataagccactgtgtgagcgactccatttcctagag
agtctcttcacaccttctgaggggatcatcatgtacacagaacagaagaaagtgacaact
gggcaagaagtaatggatgaactaaatttggcaattgataagaggttggaaggaattata
cttaaagatccaacatcagtttataaacctaatgcaaggaaaggaggctggtacaaaatc
aaaccagagtacacagaggggttaatggaccatgtggatcttattattatgggtggttac
tttggagaaggacggaggaagggcatcagtcacttccttcttggagctgctgtgccccca
gctactgaaggtatggaacctgtggagtttcattctgttgttcgtgtgggctcaggctac
tcaatgtatgagttgtcagaattacttcaaaaactttcacctcactggcagcgtgttttg
ccaggacagtgtccaccttgtcttgcatggaccaaggaaaagccagatgtatggattgct
ccacaaaattcttacatactggaggtgaaagcaacagagattgtaccaagcaaatcattc
aaagttaactttacacttcgatttcctcgagtggagactattcgctatgacaaaaagtgg
tctgattgcatgactcttacagagtttgacagcttaaggaaggaagcatctggaaagctg
tactctagacacgtggatgccagtaatgaattgcccgaatcaccaagaaagaagcagcgg
catttgactcgagtacctattaaattgggtgaacagtttcgtggtattgatatatctgga
atcgatgtggtaacagacttgttagaagggaaggagttttgtgtgctaacagattggaaa
gaacatacaaagcaagatatagaaaccaaaattgttcagaatggaggcacagttgtacaa
aacacagggcacaatacattttgtgctgtggctggaaataccacactccgcgtgcacaac
attgctaagagtggacggtatagtgttgtccatgtagactggctgctgcgttccatagct
gctggtgaactgttgccctggacacctgctgatttgttatatgcaacatcaactgtaagc
gagcagctatcagcaaagtatgatatgtttggggacagctacacacaaccgctgaataaa
gatacattgaaatatgtgtttgaacaagttgagaaaatggacagtgttgtcgacctcact
gaagaaatgttagcagatcttgaaatagaactgtttcctgggcccagtccttatggcttg
ttccgtttgtgtcgggcgtatgtggacaaatattaccggttaaatgatccattgtcaggt
gaaagtaataaattggatattgttgaagtttatttcagtttctatggaggccagacattt
ttacaaatagatgagctgaccactcatgtgattgtgcattctgagtcacaggaaaggctt
gatgagatcaaaggtctgaatgaagagagagggtgcaggttctacattgtgactgagaat
tgggtccatgagacaattaaaatgaagagcaggcaaaatgagcatgattactcattgtaa
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