Chlamydia serpentis: C10C_0125
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Entry
C10C_0125 CDS
T08163
Symbol
ligA
Name
(GenBank) DNA ligase,NAD-dependent DNA ligase LigA,3-methyladenine DNA glycosylase,DNA ligase, NAD-dependent,NAD-dependent DNA ligase adenylation domain
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
csee
Chlamydia serpentis
Pathway
csee03030
DNA replication
csee03410
Base excision repair
csee03420
Nucleotide excision repair
csee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C10C_0125 (ligA)
03410 Base excision repair
C10C_0125 (ligA)
03420 Nucleotide excision repair
C10C_0125 (ligA)
03430 Mismatch repair
C10C_0125 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csee03032
]
C10C_0125 (ligA)
03400 DNA repair and recombination proteins [BR:
csee03400
]
C10C_0125 (ligA)
Enzymes [BR:
csee01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
C10C_0125 (ligA)
DNA replication proteins [BR:
csee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C10C_0125 (ligA)
DNA repair and recombination proteins [BR:
csee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
C10C_0125 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C10C_0125 (ligA)
MMR (mismatch excision repair)
DNA ligase
C10C_0125 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C10C_0125 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
HHH_3
Nlig-Ia
PTCB-BRCT
DUF2157
Motif
Other DBs
NCBI-ProteinID:
SPN73310
UniProt:
A0A2R8FA55
LinkDB
All DBs
Position
I:156655..158643
Genome browser
AA seq
662 aa
AA seq
DB search
MTQESAREHYLTLCNEIEDHDYSYYVLHRPRISDYEYDMKIRKLLQIEESHPEWKVLWSP
SNRLGDRPSGHFSLVHHKEPMLSIANSYSLEELREFFSKIEKFLGKSPSYTIELKIDGIA
VAIRYEDHILTQALTRGNGKQGEDITANIRTIRSLPLKLPKDAPQFLEVRGEVFFSYSTF
QTINDKQQDLKKSVFANPRNAAGGTLKLLSPQEVAKRKLEISIYNVIASENSDSHYQNLQ
NCIEWGLPVSGRPRLCSNPEEVISVLQNIETERSFLPMEIDGAVIKVDSLESQKLLGVTG
KHYRWAIAYKYAPEEAETILEDIIVQVGRTGVLTPVAKLTPVLLSGSLISRASLYNEDEI
HRKDIRIGDTVCIAKGGEVIPKVIRVCKEKRSKCSQVWNMPEWCPVCHSQVVREEDKVSV
RCINPKCMAGAIEKIRFFVSRSALNIEHLGIKVITKLFELGIIHTRVDLFLLTAEDLMQV
PGIRERSAKKILESITQARNVDLDRFLVALGIPYIGVGVATVLARHFETLERLISADVEE
LLSLEGIGEKVAHAILNYFSDANHLNEIRKMQDLGVRIFHYHKPGSECSGKVFVITGTLL
GISRSDAEAAIRSCGGRTASSVSKQTDYLVVGTNPGSKLKKAKDLGVCMLDQDAFTNLVD
LK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagagagtgctcgagaacattatctaactttatgtaatgaaatagaagaccac
gattattcttattatgtcctgcatcgtcctagaatctctgattatgaatatgatatgaag
atacgcaagcttctccagatcgaggaaagtcatcccgaatggaaagtattatggtctcct
tcaaatcgtcttggagatcgcccttccggacatttttctttagttcaccataaagaaccc
atgctctcgatagctaatagctattctttggaagaattaagggaatttttctctaaaata
gagaaatttttaggaaagagcccctcatacactatagaacttaagatcgatgggattgct
gtagcaatacgttatgaagatcatattttgactcaagcgcttactcgaggaaatggtaag
cagggtgaagatattacagcaaatattcgtactatacgctctttgcctttgaagcttcct
aaagatgctccgcaatttcttgaagtgcgtggggaggtctttttctcttattctacattt
caaactatcaatgataaacaacaggaccttaaaaaaagtgtttttgctaatccaaggaat
gctgcaggaggaaccctaaaactactttcgcctcaagaagtagcaaaacgtaagttagaa
atttctatttataatgtgattgcttcagagaatagtgattcccattatcaaaatcttcaa
aactgtatcgaatggggattgccggtttctggtcgaccaagactatgttctaatccagaa
gaagttatctcagttttacagaacatagaaactgaacgtagttttttgcctatggaaatc
gatggggccgttataaaagttgacagtttagagagtcaaaagcttcttggagtaacagga
aagcattatcggtgggcaatagcttacaagtatgctccagaagaagctgaaacaattctt
gaggacatcattgtgcaagtagggagaacaggggttcttactcctgttgctaaacttacg
ccagtattgttatcaggatcgttaatatctagggcttctctatacaatgaggacgagatt
catagaaaagacatccgtattggtgatactgtttgtattgctaaggggggagaggtcatt
ccgaaagttattagggtttgtaaagaaaaacgttccaagtgttcccaagtttggaatatg
ccagaatggtgtcctgtatgccacagtcaggtagtgagagaagaggataaggtctcagtt
cgttgtataaatcctaaatgtatggcgggagcgattgagaagattcgcttttttgttagc
cgaagcgctttaaacatagagcatttaggtatcaaggtcataacaaagctttttgagcta
ggtataattcatacacgtgtagatctttttctgcttactgctgaagatttaatgcaagtc
ccggggattcgtgaacgttcagcaaaaaagattctagaaagtataactcaggctagaaat
gtcgatcttgaccgttttcttgttgctttagggattccttatataggagtaggtgttgct
acagtacttgcgcgacattttgaaacgttggaacgattgatttcagcagatgtagaagag
ctgctttctcttgagggtattggtgaaaaggttgcccacgctattcttaattatttttca
gatgctaatcatttgaatgaaattagaaaaatgcaggatttaggggtgcgaatttttcat
tatcataaaccggggtccgagtgttctgggaaggtttttgtaattacagggactttatta
gggatatctcggtcggatgcagaagctgcaattcgcagttgtggaggaaggacagcctct
tcagtctcaaaacagactgattatttagttgtcggtaccaatcctggatctaaattgaaa
aaagctaaagatttgggagtctgtatgctagatcaagacgcctttacaaatcttgttgat
ttaaaataa
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