Clavibacter seminis: KYT88_09705
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Entry
KYT88_09705 CDS
T11076
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
csei Clavibacter seminis
Pathway
csei00300
Lysine biosynthesis
csei00550
Peptidoglycan biosynthesis
csei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KYT88_09705
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KYT88_09705
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csei01011
]
KYT88_09705
Enzymes [BR:
csei01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
KYT88_09705
Peptidoglycan biosynthesis and degradation proteins [BR:
csei01011
]
Precursor biosynthesis
Amino acid ligase
KYT88_09705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
UKF24004
UniProt:
A0ABY3T9V9
LinkDB
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Position
complement(2051306..2052850)
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AA seq
514 aa
AA seq
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MTSPATPALRPEHPVARSLSGLVSDFALDVVGDVDDVEVTGVTLSSGDVQPGDLYVGLRG
VRVHGARFAADAAESGAVAVLTDPDGLADAQGSGLPVILTPDPRAALGDISAWVHRSAEN
PATLYGVTGTNGKTSVVYLLDGLLRQLGVVTGLTSTAERRIGEESITSRLTTPEASELHA
LLARMREAEVRAVTIEVSAQALTRHRVDGLVFDVAAFINLSHDHLDDYADFEEYFDAKAA
FFDPDRARRGVVSLDTEWGQRIVDGSRIPMTTIASKPGVDADWTVTVLEQTPDSTGFRLE
GPDNRVLVSRVPVPGWFMAANAGLAIVMLVESGYDLDAVAHVLDRDGGIQAYIPGRAERV
SGDTGPLFFVDYGHTPDAFEQTLQALRPFTPGKLVMVFGADGDRDTTKRAEMGAIAARLA
DVVVITDYHPRYEDPASIRASLIAGATAAVPDREIHEVPDPATAIRTAVSLVGEGDTILV
AGPGHEDYHEVAGRKIPFSARDDARAALRDAGWS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccctgccactcccgccctccgccccgagcatcccgtcgcacggtcgctgtcc
ggcctggtgagcgacttcgcgctcgacgtcgtcggcgacgtggacgacgtggaggtcacg
ggcgtcaccctgtcctccggcgacgtgcagcccggcgacctgtacgtcgggctccggggg
gtccgcgtgcacggcgcccgcttcgccgccgacgcggcggagagcggcgcggtcgcggtg
ctgaccgaccccgacgggctcgccgacgcccagggctccggcctcccggtgatcctcacc
cccgacccgcgcgccgccctcggcgacatctccgcatgggtccaccgctcggccgagaac
ccggcgacgctctacggcgtgacgggcacgaacggcaagacgagcgtggtgtacctgctc
gacggcctgctccgccagctcggcgtggtgaccgggctcacgtcgacggccgagcgccgc
atcggcgaggagagcatcaccagccggctcacgacgcccgaggcgagcgagctgcacgcg
ctcctggcgcgcatgcgcgaggccgaggtccgcgcggtgacgatcgaggtgtcggcgcag
gccctcacccggcaccgcgtcgacggcctggtgttcgacgtggccgccttcatcaacctg
agccacgaccacctcgacgactacgcggacttcgaggagtacttcgacgccaaggccgcg
ttcttcgaccccgaccgcgctcgccgcggcgtcgtctcgctcgacaccgagtggggccag
cgcatcgtggacggatcccgcatcccgatgaccacgatcgcctcgaagcccggcgtcgac
gccgactggaccgtcacggtgctcgagcagacgcccgactcgaccggtttccgcctcgag
gggcccgacaaccgggtgctcgtctcgcgcgtgcccgtgcccggctggttcatggccgcc
aacgcggggctcgccatcgtgatgctcgtcgagtccggctacgacctcgacgccgtcgcc
cacgtgctcgaccgcgacggcggcatccaggcgtacatcccgggtcgcgccgagcgcgtc
tccggcgacaccggccccctcttcttcgtcgactacgggcacacccccgacgccttcgag
cagacgctgcaggcgctgcgtccgttcacccccgggaagctcgtgatggtgttcggcgcc
gacggcgaccgcgacaccacgaagcgcgccgagatgggcgcgatcgcggcccgcctcgcc
gacgtcgtggtcatcaccgactaccacccgcgctacgaggacccggcgtccatccgggcc
agcctcatcgcgggggccacggccgcggtgcccgaccgcgagatccacgaggtgcccgac
cccgccacggcgatccgcaccgcggtgtcgctggtcggcgagggggacaccatcctcgtc
gccggacccgggcacgaggactaccacgaggtggccgggcgcaagatcccgttctccgcc
cgtgacgacgcgcgcgcggccctccgcgacgcaggctggagctga
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