Cynoglossus semilaevis (tongue sole): 103376899
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Entry
103376899 CDS
T04866
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
103376899 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
csem04050
]
103376899 (tnfrsf11a)
04090 CD molecules [BR:
csem04090
]
103376899 (tnfrsf11a)
Cytokine receptors [BR:
csem04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
103376899 (tnfrsf11a)
CD molecules [BR:
csem04090
]
Proteins
103376899 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Zn_ribbon_11
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
103376899
NCBI-ProteinID:
XP_008305674
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Position
3:complement(2585411..2601337)
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AA seq
684 aa
AA seq
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MRLIFSASWIFRGWITCAFFSFYAQNVIAKIGSRSPRDPQRISGTDERLMESKPSQCDES
HYLKDSRCCRKCGPGFRVHAHCTDAHQTKCIKCNRGEYQPSWTEEERCLQQKFCDKGKGF
MERPEDPVAEVPCRCRPQLQCHPINCEFCELIPTCSAGYGLDLDPESTNGRKVCVACKKG
FFSAENDREQCKSWTNCNAEGRTETLPGSAQADAVCGPPITGAASSWVIVSVLSVITILC
LLILLLFCYKDKLKLLSVNLRSCVQNLKRTRIQQETLAPLYPSGGPKYAPCETTKLICQT
PQSPADEPSCTFSASAPDVKVSLPFTEGMMEIEATTKKTAMENQSEGSGEPEEVSEEEGE
VVSVSPLLTGSCVCVIPIREPLEVGENEDCSQAVSPGITVTCSCKGLDGEREGEKCAKEE
RVESVMVVSEAEIGDGTKEKMVLCKSETGAASLVSLSAPLLHSSSVVPPSSPLPELCPPL
AQALMTRELKPYMTDRSLVKQEELYRLTSVESSSSENSTTPAMTSISPLMTSTSVGNLYL
EKTPEASGPERGQGIFCEDGGRSKLSSGESEPECSPESLHTQLAEPTLTSGQVSGNHNAT
FISSGQVMNFSGDVIVVYVSQSSLGSDEAGKEDAFGSPVQEEASEATTAFQGSLRSQGDS
TSHTAVSNETLPVQEVMEEQALGK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagactgatcttttcagccagttggatattccgcggctggataacgtgtgcgttcttc
agcttttacgcacagaatgtgattgcaaagattggctcccgttccccacgggatcctcaa
aggataagtggaacagatgagagattgatggagtccaaacccagccagtgtgatgaaagc
cattacctaaaagactccagatgctgcagaaagtgtgggccaggattccgtgtacacgct
cactgcactgatgcccaccagacaaagtgcattaagtgtaatcgtggtgaataccagccc
agctggactgaggaggaacgctgtctccagcagaagttctgcgataagggtaagggtttc
atggagcgacctgaggaccctgtggcggaggtgccctgccgttgccgccctcaactgcag
tgccatccgatcaactgtgagttctgtgagttgatacccacctgcagtgcaggatatgga
cttgacctggatcctgagtctaccaatggaagaaaggtctgtgtagcttgtaagaaaggg
ttcttctctgctgagaacgacagggaacaatgcaagtcatggactaattgtaatgctgag
ggcagaactgagacacttccaggcagtgcacaggccgacgctgtgtgtggcccacccata
actggtgcagcttcgtcctgggtcattgtttcagttctgtcagtcatcactattctctgt
ctgctcatacttctccttttctgctacaaggacaaactgaaattactctctgtaaatctg
cggtcctgtgttcagaatctaaagaggaccaggattcagcaggagaccttggcccctctt
taccccagtggaggtcctaagtatgcaccatgtgagacgaccaagttgatttgtcaaacg
cctcagagtccagcagatgaaccctcgtgcacattctccgcctcagctccagacgtcaaa
gtctcgctgccattcacggaaggaatgatggagatagaagctaccaccaagaagacagca
atggagaatcagagtgagggatctggagagccagaggaggtgtcagaggaggaaggggag
gttgtgagtgtgtcccctcttttgacaggttcctgtgtgtgcgtcattcctatccgtgag
ccactggaagtaggggaaaacgaggactgcagtcaggctgtcagccctggaataacagtc
acctgttcctgtaaagggctggacggagagagagaaggagagaagtgtgctaaagaagag
agggtggagagtgtgatggtggttagtgaagcagagatcggcgatgggactaaggaaaag
atggttttgtgtaagagcgaaacaggcgctgcatctcttgtctctctctcagctcctctc
ctccactcctcttctgtcgtccctccgtccagtccacttcctgaactctgccctcctttg
gcccaggctctgatgacacgagagctcaaaccttacatgactgacaggtcactggtaaaa
caggaggaattgtacagactgacaagcgtggaatctagttcatcagagaacagtacgacc
cctgccatgacctccatcagtcccttgatgacctccacatctgtagggaatctgtacctg
gagaagactcctgaggcctctggtccagagcgaggtcagggaattttctgtgaggacggt
ggaagaagcaagctctcatctggagagtcagaaccggagtgttcacctgagagccttcac
actcaactggctgaaccaactcttacctcaggtcaggtgtcggggaaccacaacgccacc
ttcatctccagtggtcaggtgatgaacttcagcggcgatgtcatcgttgtgtatgtcagc
cagtcgtccttgggcagtgatgaggcggggaaggaggatgccttcgggagccctgtccag
gaagaggccagtgaggcaacaacagccttccagggcagcctgaggtcacaaggggattcc
acctcccacaccgcagtgtcgaacgagactctgccagttcaagaggtgatggaggagcag
gcactggggaagtga
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