Cynoglossus semilaevis (tongue sole): 103378218
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Entry
103378218 CDS
T04866
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04530
Tight junction
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103378218
09142 Cell motility
04810 Regulation of actin cytoskeleton
103378218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103378218
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103378218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
103378218
NCBI-ProteinID:
XP_008307560
LinkDB
All DBs
Position
4:13680716..13718730
Genome browser
AA seq
1580 aa
AA seq
DB search
MGNIESQIGDHGLYSNERGHWSRKQMSRSLRISNKQSRRSRHASSGKIEHRNSETSTRSS
STPSIPQSLADNGLEPFNETNILPDFGSPIWVDRVAMNLRPVSFHHDLASPSVHRNTIHI
TLPGPTADELQDDDTYMGEVTYLQKTLDGTKQTIVFSKKRSKSADMWRDDSLEFSLSDLS
QEQLTSTEEIRDAAHVRDFTDCEGRFHRSPTDCTDRANSLEELYRQKSPTRKQPHARFAK
WHNASRTMREGEDDKMRSPSQEDGNSYSAFTLPCRRSHCLSEGLRSHQAAMSANMQGRRA
KTIQDVTAGDCSEYEDSGIDGVTVEQEHQSRRYKTMSASFSVCSANGRSMFAGSDSGSSS
GGGGPNECVQGVYENFRQELEMSSCQTESLEEAGSALSDEQSTMSSAYQSDPMLSVTQGM
VRKAGRLAVKNFLVHKKNKKVESATRRKWKSYWVSLKGCTLFFYETNGSLGIDNSSIPKH
AIWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTCSQTELENWITAIHSACATAVARQ
HHREDTVRLLQAEIKKLEQKIDMDEKMKKMGDMQLSSVTDTKKRKTILDQIFLWEQNLEQ
FHMDLFRFRCYLASLQGGELPNPKRLLAVASRPTKLAMGRLGIFSVSSFHALVAARTETG
IRRRTQAMSRSCSKRKSRFSSLWGLDTTSKKNTKAHPTINQVFADGSNMEKQAVDEVLVN
PAKEHRKSEEGSVRILPRPSTESDIWVPDHLTPSWVCLPNDQPVLAIIQPGESALCVLEN
ICKAHKLDPTKHYLQLKFLIENKVQFYIPKPEEDICDLIYKEIELHSKITKVIQFDRDES
CMIGYGFSISVVEEDGVQQLYITDVKAGGLAFAKGLNAGDEILELNGKGSHSLTFSDMKA
AFSQASLALTVNTMPSVDRRQLCYLPPRRSDEDEDGYTDIFSQNQEERLDDGVGLFVESS
GDSLDDDSEIFSESECSKSTEQVTAFCRSLHDMNPSECLSSSPSPDSPFPSPLTPRQLSD
ADKLRKVICELVETERTYVKDLNWLIGRYLTPLQKETFLTQDELDVLFGNLPEMVEFQVE
FLKTLEDGTRLVPDLEKLERVDQFKKILFSLGGSFLYYADRFKIYSAFCASHTKVPKVLV
KAKTDHEFKAFLDERNPKQQHSSTLESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHL
DVAMKAMNKVASHINEMQKIHEEFGAVFDQLIVEQSSEKKEVADLSMGDLLLHTSVTWIN
PPASLGKWKKEPQIVIFVFKTAVVFVCKDGSKQKKKMGASHRVSISSDEKDPFRFRHMIP
TDALQVRSLSNTDVEGSTLCEIVHQRSESEGRPERTFQLCCSSPESRKDFLKTVHSILRE
KHRRQLLKTESLPLSQQYVPFGGKRLCALKGARPTINRAASAPTRTLGRRKLVRNRFTID
TDIVFDGEPDQDLTSSQELDSDPLPKEEKAEQLQPELTGDTDRWVEEQFHLEDYEEQEEM
KETDILSDDDDEFCQTPRATSAEADLEASVTALSLESEDTEESESLMSPTVGGTDAVDDP
QKAEGDEVWVRRDELTPPSD
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatattgagagccagattggggaccatggtctttacagtaacgagcggggccat
tggtcacgtaaacaaatgtcccgttctcttcgtatctccaacaagcagtccaggcgttct
cggcatgcttcatctggcaaaatagagcacaggaactctgagacaagcacgcgctccagt
agcacccccagtatcccacaatcccttgctgacaatggcctggaacctttcaatgagacc
aacatcctcccagattttggaagtccgatttgggtagaccgcgtggccatgaaccttaga
cctgtgtccttccaccatgacctggccagtccttcggtgcacaggaacacgatacacatc
accctgcctggacccactgcagatgagctgcaggatgacgacacgtacatgggagaagtg
acttatcttcagaaaactttggatgggactaaacaaacgattgtcttctcaaagaaaagg
tccaaatcagcagacatgtggcgagatgacagcctggagttctccctgtcggacctcagt
caggaacagctgaccagcacagaggagatcagagacgcagcccatgtgagggactttact
gactgtgaaggccgctttcatcgcagccccacagactgcactgacagggcaaactctttg
gaagagctgtacaggcagaagagcccaactcgcaagcaaccccatgcccgctttgccaag
tggcacaatgccagcaggactatgagggagggtgaggatgataaaatgcgttctccatca
caggaggatggcaacagttacagtgcatttaccctaccatgccgacgttcccactgtctg
tctgaaggcctgcgtagccaccaggctgccatgtctgctaatatgcagggcaggagggca
aagactatacaggatgtcacagccggggattgcagtgagtatgaggacagtggaatcgat
ggcgtcaccgtggagcaggagcaccagtccagacgttacaagaccatgtctgcctccttc
tccgtttgctcggcaaacggaagaagtatgtttgccggaagtgatagtggaagcagcagt
ggcggcggtggccccaacgagtgtgtgcagggtgtgtatgagaacttccggcaggaattg
gagatgagttcctgccaaacggagagcttggaggaggcgggttctgccttaagtgatgaa
cagagtacaatgagctccgcctaccagtctgaccccatgctcagtgtcactcagggaatg
gtgcgaaaagctggcaggctggcagtcaagaactttcttgtacacaagaagaacaagaaa
gtggagtcagccaccagacgcaagtggaaaagttactgggtgtctctgaaaggttgcact
ctgttcttttatgagaccaatggcagtttagggatcgacaacagcagtatccccaagcat
gccatctgggtcgagaacagcattgtgcaggctgtaccagaacatccaaaaaaagacttt
gtgttttgtctcagcaactccctgggagacgcttttctgttccaaacctgcagccagaca
gagctggagaactggatcacagcaatccactcggcatgtgccactgcggtggcccgccaa
caccacagagaagacacagttcggctgctgcaggccgagatcaagaagctggagcaaaag
atcgacatggacgagaagatgaagaagatgggagacatgcagctgtcgtctgtcactgac
actaagaagagaaagacaatcctggatcagatcttcctttgggagcagaacctggaacag
tttcacatggatctatttcgcttcaggtgttatctggccagccttcagggaggagaactg
cccaaccctaaacgtctgctggctgttgcctcccgccccactaagctggcaatgggccga
ctgggtattttctctgtgtcctccttccacgcactggtggccgcacgcacagagactgga
atacgacggcgaacacaggccatgtctcgttcctgcagcaagcgcaagagcaggttctcc
tcactgtggggtttggacactacctcaaagaaaaacacaaaagcccacccaactattaac
caggtctttgctgatgggagcaacatggaaaaacaggctgtagatgaggttttagtgaac
ccggctaaggaacacagaaaaagtgaggaaggaagtgtgaggattctcccacggcccagc
acagagagtgacatctgggtccctgaccacctgaccccctcctgggtttgtttgcccaat
gaccagccagtattagccatcatccaaccaggggagtcagcgctgtgcgttctggaaaac
atctgcaaggctcacaagctggaccctacgaagcactacttacagctcaagttcctcatt
gaaaacaaagtgcagttctacatccctaaacctgaggaggacatatgtgacctgatctat
aaagaaattgaactccactccaagattaccaaagtgatccagtttgacagagacgagtcc
tgcatgataggatacggtttctccatttcggtggtggaggaagacggtgttcagcagctc
tacatcactgacgtgaaggctggtggattagcctttgccaaaggtttgaatgcaggcgat
gaaatactggagctgaatggaaaaggctcccacagtctcaccttctctgacatgaaggca
gctttctcccaagcttcactagcgttgacggtcaacacgatgccctctgtggaccgccgt
cagctctgctatctgccgccacgtcgctcagacgaagatgaagatggctacactgacatc
ttctctcagaaccaagaggagagacttgacgatggtgttggtctgttcgtggagagctca
ggagacagcctggacgatgactctgagatattcagcgagtcagaatgcagtaaaagcacg
gagcaggtcactgccttctgtcgcagtctccatgacatgaatccgtcggagtgtttatcg
tcttctccgagcccggactcaccctttccatctccactgacgcctcgacagctttctgat
gccgacaagctccgtaaagtcatctgtgagctggtggagacagaacgcacctacgtcaaa
gatctgaattggctgattgggagatatttaaccccactgcaaaaagagacatttctcact
caagacgagctggatgtgctgtttggaaaccttccagaaatggtggagttccaagttgag
tttctcaaaaccctggaagatgggactcgactggtcccggatctggagaagctggagagg
gtggatcagtttaagaaaattctcttttccctcggaggctccttcctgtactatgcagac
cgttttaaaatctacagtgctttctgtgccagccacaccaaagtccctaaggtccttgta
aaggctaaaacagaccacgaattcaaggccttcctggatgaacgcaaccctaagcagcag
cactcctccacactggagtcgtaccttatcaaaccgatccagagggttctgaagtatcct
cttctactgaaggaactctactcactcacagacccggacagcgaggagcactaccacctg
gatgttgccatgaaggccatgaataaagttgccagccacatcaatgagatgcagaagatc
cacgaggagtttggagccgtgttcgatcagctcatcgtggagcagagcagcgaaaagaaa
gaggtggctgatttgtctatgggggatttgttgctccacaccagtgtgacctggatcaat
cctcctgcctccttgggaaaatggaagaaagagcctcagattgttatatttgtgtttaaa
actgccgtggtcttcgtgtgcaaggatggatctaaacagaagaagaaaatgggtgcctcc
catcgagtctccatatcttcagatgagaaagatccattccgattccgtcacatgatccca
actgatgctcttcaagtccgatccttgtctaatacagatgttgagggctctactctctgt
gagatcgtccaccaacgctcagagtcagagggaaggccagagaggacgtttcagctgtgc
tgtagttctccagagagcagaaaagactttttgaaaacagtccattcgatcttgagggag
aagcaccggcgtcagctcctaaaaacagagagcctacccctcagccagcagtatgttccc
tttggagggaagcgtctgtgtgccttgaagggggcacgtcccaccataaatagagcagcg
tcagctccaaccaggactcttggcagaagaaaacttgtgcgcaaccgtttcaccattgac
acagacattgtttttgacggtgaacccgaccaggacctcacgtcctcacaggagctggac
tctgatccgctgccgaaggaggagaaagccgagcagctgcagcctgagctgacgggtgac
acagaccgctgggtggaggagcagttccacttagaagactatgaggagcaggaggagatg
aaggagactgacatcctgagcgacgacgacgacgagttctgtcagactcccagggccacg
tcggctgaagcagacctagaggcttctgtcacggccttgtccttggaaagtgaggacact
gaggagagcgaaagcctcatgtccccgaccgtcggtgggactgatgctgtggacgatccc
caaaaagcagaaggagatgaggtttgggtgcggagggatgaactgacgccgccttcagac
tag
DBGET
integrated database retrieval system
