Cynoglossus semilaevis (tongue sole): 103378810 Help Entry 103378810         CDS       T04866                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism csem  Cynoglossus semilaevis (tongue sole) Pathway csem04010   MAPK signaling pathway csem04120   Ubiquitin mediated proteolysis csem04140   Autophagy - animal csem04144   Endocytosis csem04517   IgSF CAM signaling csem04620   Toll-like receptor signaling pathway csem04621   NOD-like receptor signaling pathway csem04622   RIG-I-like receptor signaling pathway csem05132   Salmonella infection csem05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:csem00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103378810 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     103378810 (traf6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     103378810 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     103378810 (traf6)    04140 Autophagy - animal     103378810 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     103378810 (traf6)    04621 NOD-like receptor signaling pathway     103378810 (traf6)    04622 RIG-I-like receptor signaling pathway     103378810 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     103378810 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     103378810 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csem04131]     103378810 (traf6)    04121 Ubiquitin system [BR:csem04121]     103378810 (traf6) Enzymes [BR:csem01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103378810 (traf6) Membrane trafficking [BR:csem04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     103378810 (traf6) Ubiquitin system [BR:csem04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     103378810 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 TRAF6_Z2 zf-C3HC4_4 zf-RING_5 U-box RING_XB3-XBAT31 zf-RING_11 TRAF3_RING zf-TRAF_2 zf-RING_6 DM Motif Other DBs NCBI-GeneID:  103378810 NCBI-ProteinID:  XP_008308373 UniProt:  A0A3P8UX49 LinkDB All DBs Position 5:complement(6557395..6562387) Genome browser AA seq 576 aa AA seqDB search MVMMASFESKKRSLEEDSVEGAVGGELSNCALAMLEQERESLLSPSEGSVTLLSSTSSSL QTPAPLQGYDVEFDPPLESKYECPICLMALRNAVQTPCGHRFCKNCIEKSIRDTGQRCPV DNVILSEDQLFPDNFAKREILSLTVCCPNSGCVEKMELRHLENHLMVCEFATASCPQCQQ SVRKSRLEEHTTVECARRPVSCPDCVACFVYEEKELHEQQCPFANVKCQYCGMELIRDQM ESHCDTDCPKAPIACNFSTFGCKEQMQRHNLAQHMQEFTQMHMWYMAEFLRGLSLNGTTS KSLRAHGPAASCDDQEAAATERNSSGARRPVGGNGSSNCAPSQPSEGMQQLREMDARLVK QDHQIRELTIYKETQAGQLAELRRRVVVLEETVKELEAQQCRGIFIWRLKGFSALLRNQE AGLPVVEHSPGFYTGCPGYKLCLRLHLQAPNALRCSNFISLFVHTMQGSFDGQLTWPFQG TIRLAILDQGPEGQHHMEVMETKPDLQAFQKPSMQRNPKGFGYVTFMHLQQLSQKTFVKD DTLLIRCDVTPRFDSMPHREAPVVQARGLEASFSKD NT seq 1731 nt NT seq  +upstreamnt  +downstreamnt atggtaatgatggctagctttgaaagcaaaaagagaagtctggaagaagacagtgttgaa ggagctgttggtggagagctgtccaattgtgctttggcaatgctggaacaagagcgagaa tcccttctcagcccatctgaaggctctgtaaccttactaagcagcacctctagtagtctt cagacacccgcccctctccagggctatgatgtagagtttgacccacccctagagagtaaa tatgagtgccccatctgcctcatggctttgaggaatgcagttcaaactccatgtggtcat cgcttttgcaagaactgcatagagaagtccattcgtgatacaggacaaagatgcccagtg gacaatgtaatcttgtcagaagatcagctgtttccagataactttgctaaaagggagatt ctctcactaacagtttgctgtccaaactctggatgtgttgaaaaaatggagctaaggcat ttggagaatcatctgatggtgtgtgaatttgccacagcctcttgcccacagtgccagcag tctgtcaggaagagcagactagaagaacacacaactgtagagtgtgctagaagaccagtt tcatgtccagactgtgtagcatgttttgtttatgaggagaaagagcttcatgagcagcag tgtccctttgccaatgtaaagtgtcaatactgtgggatggagctcatcagagatcagatg gaatctcactgtgatacagattgccccaaagcacccatagcctgtaactttagcactttt ggatgtaaagaacagatgcagcgtcataacttggctcagcacatgcaggagttcacacag atgcatatgtggtacatggcagagttcctgcgtggcctcagcctcaatggtaccacatct aaatctctgagagcacatggacctgctgcttcttgtgatgaccaagaagctgcagcaaca gaacgtaactccagcggggcccgaagacctgtagggggtaacggcagcagcaactgtgct ccttctcagcccagtgagggaatgcagcagctcagagagatggatgcacgattggtgaag caggaccaccaaattcgtgagctaactatttataaagaaacacaggctggtcaattagca gagcttaggcgaagggtggtggtgctagaagaaactgttaaggagctggaggcccagcag tgtcgtggtatttttatctggcgtcttaaaggtttttctgctctcctgcggaaccaagaa gcaggactgcccgtggtagagcacagcccaggcttctacacaggctgtccaggctataag ctgtgcttgcgtttacatcttcaggctcccaacgcccttcgctgctccaacttcatttcc ctctttgttcacacaatgcaaggatcttttgacgggcagttaacttggccttttcaaggc accatcaggcttgccatcctagaccagggacctgagggtcagcatcacatggaggtgatg gaaaccaaacccgatctgcaagcgtttcagaagccctccatgcaacgcaaccctaaagga tttggctatgttacctttatgcacctacagcagctaagtcagaaaacctttgtcaaagac gacaccctcctgatccgctgtgacgttacgccgcggtttgacagcatgcctcatcgcgag gcacctgtggtccaggcaagaggcctcgaagcctcattttcaaaagactaa

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