Cynoglossus semilaevis (tongue sole): 103379767
Help
Entry
103379767 CDS
T04866
Symbol
c1h9orf72
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103379767 (c1h9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103379767 (c1h9orf72)
Membrane trafficking [BR:
csem04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
103379767 (c1h9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
103379767
NCBI-ProteinID:
XP_016887066
LinkDB
All DBs
Position
1:1954777..1960525
Genome browser
AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVTVPGECPLLAATFAYWDNILGPRVRHIWTPRGDQPMFLNDGEV
TFLANHTLNGEILRSAECGAIDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHAICVERLKHVIRKGRIWMQKGYNIISVLSMEIQPIMELLASMKSHSVAEDV
DIRDTVLNDDDIGDSCHEDFLHKAVSSHLQTCGCSIVVGSNAEKVNKIVRTLCLFLTPAE
RKCSRLCRTDSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRCYMRSELSALWKTFSEEDIPPDTVIHTDESFTPDLNIFQDVTHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKSLTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLNIVMALAEKLRAGLHSFVFGKPFYTSVQERDLLMTL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccaccccagtctcctgctgtggctaaatctgaggtaacagtccca
ggagaatgtccgttgctggctgccacctttgcttattgggacaacatactgggtccacgg
gtccgccacatctggacccccaggggcgaccagcccatgtttctcaatgatggcgaggtt
acctttctggccaaccatactctcaacggggagattctgcgcagcgctgaatgcggtgcc
atcgacgtgaagtttttcgttttggcagaaaaaggagttatcatcgtgtctcttattttt
gacggtgaactcaagggggacaagaacacctgtgccctgtccatcatcctgccccagacg
gagctggccttctaccttccgctgcacgccatctgtgttgagaggctgaagcacgtcatt
cgcaagggacgcatttggatgcagaagggctacaacatcatctcagtgctgagcatggag
atccagccaatcatggagctgctggcctccatgaagtcacacagtgtggcagaagatgta
gatattagagacacggtgctgaatgacgatgacattggcgacagctgccacgaggatttc
cttcacaaggccgtcagttctcacctacagacctgtggctgttccatcgtggttggaagc
aacgcagagaaagtcaacaagattgtgcggactctctgcctcttcctcaccccagcagag
aggaagtgttcccgactctgtaggacggactcgtcctttaaatacgacactggtctgttc
gtccagggactgctgaaggactccacaggaagcttcgtcctgcccttccgtcaggttctc
tactctccgtaccccaccactcacatcgacgtggacatcaacaccgtgaagcagatgccg
ccgtgccacgagcacacgtacaaccagagatgctacatgaggtcagagctcagcgcgttg
tggaagacgttcagtgaggaagacatccctccagacacagtcattcacactgacgagagc
ttcacacctgacctgaacatattccaggacgtcacacataaagacactttggtgaagtca
tttattgacgaggtgttcatgctgaagcctggcctgtccctgaggagcacctacctggcc
cagttcctgctgctgctccacaggaagtccctcacactgctcaagtacatcgaggatgaa
acgcaaaaaggaaaaaaaccttttcgctcccttcgcaacttaaagacagacctggacctg
acagtagagggcgacctgaacatcgtgatggccttggctgagaagctgagggcggggctt
cactccttcgtgtttgggaagcccttctacaccagcgtgcaggagcgagacctcctcatg
acgttgtga
DBGET
integrated database retrieval system