Cynoglossus semilaevis (tongue sole): 103382593
Help
Entry
103382593 CDS
T04866
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103382593 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103382593 (irf5)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
103382593 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
103382593
NCBI-ProteinID:
XP_008313654
LinkDB
All DBs
Position
8:complement(18482121..18487319)
Genome browser
AA seq
463 aa
AA seq
DB search
MSVQPRRIRLKPWLVAQVNSCRYPGLQWIGPDHRLFQIPWKHATRHMPTSDEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPFKIYEVCEEPGGA
GEPKDGVEDDNDDEMPQLMDLSINPRIIDSAPFSSFPPHSNVNPFGCLPTPPLLLPVPSN
LHNQALNGPTNGLHLDSLLPSTEPDPMEASSMGEMGNLEDPQTYDLLNSIPLTDLDLKFQ
YRGKIMKSLTVSNLQGCRLYYGHLEPTPDQVDLFGPVNLQQVQFPGTSEIQSEKQKHYTN
ALLDVMDRGLILEMWEQDIYAIRLCQCKVFWSGPGMSEQGPPNSMEREKKIKVFSLNDFL
RGLILFQKGEAPSPPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPVVAKILTEMFSGELSW
STDSIRLQISNPDVKDHTVAQFKELQKLLQSQNIQGPWAPNLS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgcaacctcgccgcattcgtctcaagccgtggttggtggcgcaggtgaacagc
tgcaggtacccaggtctgcagtggatcggtccagatcacagactcttccagatcccatgg
aaacatgctacgcggcacatgccgacctcagatgaagagaacaccatattcaaggcctgg
gccctggaaactggtaaataccaagaaggtgtggatgaacccgaccctgctaagtggaaa
gcgaacctccgttgcgccctgaacaagagccgtgaattccagcttaaatatgacggaacg
aaagagacgccagtacagccattcaagatctatgaggtctgtgaggagccagggggcgca
ggtgagcctaaagatggtgtcgaagacgacaacgatgatgagatgccacagctcatggac
ctcagcatcaaccccaggatcattgactcggcccccttcagttccttcccgcctcactca
aacgtaaacccttttggctgtcttccgacaccaccgttgctccttcctgtgccgtctaac
cttcacaatcaggccttgaatggaccgactaatggacttcacctggactctctactgccc
tctactgaaccagacccgatggaggccagcagcatgggtgaaatggggaacctggaagat
cctcagacgtacgacctgttgaacagcattcctttaacagacctagatttgaagttccag
taccgaggcaaaatcatgaagtccctcacagtgagtaaccttcagggctgccggctttac
tacggacacctggagccaacaccagatcaggtggacttgtttggaccggttaacttgcaa
caggtccagtttccaggaacgtctgagatccagagcgagaagcagaagcactacaccaac
gccctgctggacgtgatggaccggggcctgatcctggagatgtgggaacaggacatctac
gccattcgcctgtgccagtgtaaggtgttctggtctggaccaggcatgtctgaacagggt
cctccaaactccatggagcgagagaagaagatcaaagtttttagcctcaacgacttcctg
cgaggtctgatcctgttccagaaaggcgaagctccaagtccgccaccatttgagatctac
ttctgctttggagaagactggcctgataaaaaacccaaagaaaagaaactcatcatcgtc
caggtggttcctgtggttgctaagattctgactgagatgttctctggagaactcagctgg
tccacagacagcatccgattacagatctccaacccggacgtcaaagaccatacggtggcc
cagttcaaagagctgcagaagctcctgcagagccagaacatacagggtccatgggcccca
aacctgtcctga
DBGET
integrated database retrieval system
