Cynoglossus semilaevis (tongue sole): 103382677
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Entry
103382677 CDS
T04866
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X2
KO
K02084
apoptotic protease-activating factor
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04115
p53 signaling pathway
csem04210
Apoptosis
csem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103382677 (apaf1)
04115 p53 signaling pathway
103382677 (apaf1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103382677 (apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
APAF1_C
NB-ARC
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
APAF-1-like_WHD
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
CARD
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_HPS5
PEP5_VPS11_N
Ge1_WD40
WD40_like
Beta-prop_Vps41
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
CARD_2
Beta-prop_SPT8
WDR54
Beta-prop_Nup120_160
AAA_16
Utp8_b_propeller
Dark_WHD
AAA_22
nSTAND1
Motif
Other DBs
NCBI-GeneID:
103382677
NCBI-ProteinID:
XP_008313764
UniProt:
A0A3P8VCJ3
LinkDB
All DBs
Position
8:19253112..19283379
Genome browser
AA seq
1258 aa
AA seq
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MALDEASRSCLLRFRHRLEQDIKPSYLMDHMISDGVISVDEEEKVRIQPTRKDQAASLIE
LLLRKDNCAFISFYNALVKEAYDDLARLLYDNLPQISSNGYEKLSDENTSYVQMLLSEGG
VPQRPVVFVSRPELLNRLREKLYRLKEDSGWVTVFGMAGSGKSVLAAEAVRHQDLLGDCF
PGGVHWLSIGQLEKPDLLLKIQSLCFRLEQNLHSHSAHRCPNSLDEAKERLRFLMLRRYP
RSLLMLDDVWDSSVLKVFDIHCRILLTTRNRGLTDSVSGAKYEVEVESGLEESKALEILG
LYTDIQPHGLPEEARRIVVECKGSPLVVSLIGALLKDKPNRWQYYLRQLQQKQFKRIRKS
SSYDYDALDQAMAASIEVLPEEHQELYKYLTVFEKDIKIPAKVLSVLWDLEEEEVEDILQ
GFVDKSLLFVDNNNKPCLYYLHDLQLDFLVEQNRNQLESLHTKMVRQYQQHYRDGPPISK
DKDCLYWIRFLTYHMAKASLSQELYSLMFSLDWVCTKAQIMGPAHLINDYMEYGPSLDKE
NDGVRSHFQEFLSLNGHQLEQRPFPDVVQLALSEPHTSDVYRQALVQALDRANRGKLYFD
WLNKNSVENLSLLVIHPHQGSINSACFSNDGTKIATCGASKTLKVFRSTTGEKLTEIQAH
DDEVLCCAFSPDDCLIATCSSDRKVKIWNLDRDMLLRVFSEEHEEQINHCQFTNLRRQVL
LATCSNDKFLNVKLWNLNKPTCQNTLFSHLEPVNHCCFSPNDTYLSTSSNDGTVKLFQVS
SANVWKTINVSSMFSESDETVPVKCSTWTGDGKRIACAARNAVLLFDVETSDMLLEIKTN
RLSTVQYCHACPTSNLLAIAFSNYGVELWDLVANKKMADCSGHLSWVQRVQFSLDGSQLL
SCSDDQTVRLWETKKVHTTSAVCLKRDSDVVFNDGEVVVSAADNCNRLQVREGPSGSLLF
QSEEKSSRIRCTCLCRQPFVVALGQENGTVQVLELASGKPLATLQGHTKTVLHCKFIHDG
QTLITSSEDTTIRVWAWPSGECKVLRGHKEQVRCFSLLSNSASESRLLSWSYDGTVKVWD
IKSGETMRDIDAHVGAILSCHVSPDGCFFATASADKTVKLWLCETWQCVHRLSGHQECVR
SCRFSWDSRRLATGDDNGEIRLWNVKDGTLLKICSRDGKDGMDSLHGGWVTDLHFSPDDS
LLVSTGGYIKWWDVERGEALQTFFPRGNALKRIHVSSDFSTFVTVDSIGFLYVLQRVV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggatgaagcatctcgcagctgtctgttgcgcttccgtcacagactggaacag
gatatcaagccctcatatcttatggatcacatgatcagtgatggtgtgatcagtgtagat
gaggaggaaaaagtcaggatacagccaaccagaaaagaccaggctgcttctctgatcgag
cttctcctgaggaaagacaactgtgccttcatctcgttctataatgctctggtcaaagag
gcatatgacgatttagccaggttgctgtatgacaaccttccacagatttcctccaatggt
tatgaaaagctgtctgatgagaacacgtcctatgttcaaatgctgctaagtgaaggtggt
gtgcctcagagacccgtagtgtttgtcagccgaccagagcttttgaaccggcttagagag
aaactttatcgtttgaaggaagattcaggctgggtcactgtttttgggatggcaggctca
ggaaaatctgttctggctgccgaggctgttcgacaccaagacctccttggtgattgcttt
cctggtggtgtccactggttgtccattggccagttggagaaacctgaccttttgctaaag
atccagtcattatgtttccgtctggagcagaatctgcattcccactctgcccatcgttgt
ccaaactctttagatgaggccaaggagcgtctgcgcttcctcatgctccgcagatatccg
agatctctgctgatgttagatgacgtctgggacagctcagtgcttaaagtctttgacatc
cactgtcgcattctcctgaccaccagaaatagaggcctcaccgattccgttagtggggcc
aagtatgaggttgaagttgagagtggtctggaggaaagcaaggcactggaaatactggga
ctgtacactgacatccaacctcatggactgcctgaggaggctcggcgcatcgtcgtagag
tgtaaaggttcccccctggtggtgtcgctgatcggggctctgcttaaggataaaccaaac
cgctggcagtattacctacgccagcttcagcagaagcagtttaagcgaatacgtaagtcc
tcctcctatgattacgacgccctggaccaggccatggctgcgagcattgaggtgctgcct
gaggaacatcaagagctttacaagtatctgactgtgtttgagaaggacatcaaaattcca
gctaaggttctgtcagttctgtgggacctggaggaggaggaggtggaggacatcctccag
gggtttgttgacaaatccctgctttttgtggacaataacaacaaaccctgtctgtattac
ctccatgaccttcagctggactttctggtggagcagaatcgcaaccagctagagagcctt
cacactaagatggtgcgtcagtaccagcagcactacagagatggtccgccgatctccaaa
gacaaagattgtctttactggattaggtttttgacctaccacatggctaaagctagcctt
tctcaggaactctattcactaatgttttctctggactgggtttgcaccaaggcccagata
atgggtccagcccacctcatcaatgactacatggagtacggaccaagtttagacaaagag
aacgatggcgtgcgtagtcatttccaagagttcctgtccctaaatggccaccagctggag
cagcgtccctttccagatgtggttcaactggcattgtctgagcctcatacttcagatgtt
tatagacaggccctagtgcaggcactggacagagcaaacagagggaaactctactttgac
tggttgaataagaacagcgtagagaatctgtctctcctggtgatccacccacaccagggc
tccatcaactcagcctgcttctccaatgatggaaccaagatcgccacttgtggagccagt
aagacactcaaggtgtttagaagcaccacaggtgagaagctcacggagatccaggcccac
gatgacgaggttctctgttgtgccttctcccctgacgattgtctcatcgccacctgctct
agtgaccggaaagttaagatttggaatttggatcgtgatatgctgctgagggtcttctca
gaggagcatgaagagcagatcaaccattgtcagttcacaaacctgaggagacaagtcctc
ctggctacatgctccaatgacaagttcttaaatgtgaagctgtggaatctgaacaaaccc
acttgccaaaataccttgttcagccacttggagccagtcaatcactgttgtttttcacca
aacgacacatatttgtctacatcctccaacgatggcaccgtcaagctgtttcaggtgtca
tctgccaatgtgtggaagaccatcaatgtgagcagcatgttctcagagagtgacgagaca
gtcccggttaagtgcagcacctggacaggagacggcaaacgaatagcatgtgcagccaga
aacgcagttttgttgtttgatgtggagacgtcagacatgttgttagagatcaaaaccaac
cgtctcagcacagtccagtactgtcacgcctgtcccactagtaacctgttggccatcgct
ttctccaactatggtgtggagctgtgggacctcgtggctaacaaaaagatggccgactgc
agtggacacctgagttgggtccagagagttcagttctctctggatggctcacagctgctc
tcctgctcagatgaccagaccgtcaggctatgggagactaagaaagttcacaccacttct
gccgtctgcctgaagagagattctgatgtcgttttcaatgatggagaggtcgtagtttct
gctgcagacaactgcaacaggctacaggtacgtgagggtccatcaggatcgctgctgttc
cagtcggaagaaaagtcgtccaggatcaggtgtacttgtctgtgcaggcagccatttgtt
gtggctctgggccaagaaaatggaactgtacaggtgttggagttggcctcaggaaagcct
ctggccactctgcagggacacaccaagacagttcttcactgcaagttcatccacgatggc
caaaccctcatcacatcgtcggaggacaccaccatcagggtgtgggcgtggccgtctgga
gagtgtaaagtacttcggggtcacaaagaacaagtccgatgcttctcacttctctccaac
tcagcatctgagtcccgactcctgtcctggtcgtacgatggtaccgttaaggtgtgggac
ataaaaagtggagagacaatgcgggacatcgacgctcatgtgggagccattctgtcctgt
catgtctcgccagacggctgcttttttgccactgcctctgctgacaagactgtgaagttg
tggctctgtgagacctggcagtgtgtccacagactcagcggccaccaggagtgcgtcagg
agctgcaggttctcctgggacagtcgacgtctagccactggagacgacaacggcgagatc
agactgtggaacgtcaaagatgggactctgctgaagatttgctcaagggacggtaaagac
ggcatggactcactgcacggaggctgggtgactgatctccacttctcacccgacgactcc
ctcctggtctccaccggaggctacatcaagtggtgggatgtggagcgaggcgaggccttg
cagactttcttcccgaggggaaacgctctcaaaaggatccacgtgtcgtcggacttctcc
accttcgtcacagtggacagcattggttttctctacgtcttgcagagagtggtctga
DBGET
integrated database retrieval system
