Cynoglossus semilaevis (tongue sole): 103383491
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Entry
103383491 CDS
T04866
Symbol
smcr8
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8 protein
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103383491 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103383491 (smcr8)
Membrane trafficking [BR:
csem04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
103383491 (smcr8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
103383491
NCBI-ProteinID:
XP_016890680
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All DBs
Position
9:4675749..4681972
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AA seq
897 aa
AA seq
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MIGSPDLLAFTGPEEFDEGEEEQEAAVLPEELSVPLLPPCRPWSSSAHFHRDFVLVAEFS
EQVGPKPVLTIPDDPAVIGSFDLNHFSVRIMSVDYQASGPLPSSPASPGPRLNFSEDSKV
ILGDSAEDAFAYVQYLTLYDLQARGMVRPFCMAYVCSDQSKLMENFVELSSCFSQASDSL
KTGNRQAFSMELQRKLTDLEYTRLTLLQDTEQPSSVHVSPADGDVAQDLEAVERSIQNHR
DLLRQVTSYPNRKLQQPDFLPYDPADSLTDPTPLQPPERRPSTFTFSSALSPSRSECSLK
PLQELCNAYFLSLMQEQLADTERRLQGDRSVLRTSCVSGSLYRKLTLTNFLFELGSKGNE
EEEQESSEAELQKVMKSSAGVSRSEPVSLESFCSCVEEIPIKLEQEETMTSDLTVLLDLT
GSVSSSDSIEVLGTEKSYHTQCVDGGAEGGAQTQMEATPRRMPSDATVKCVRAYARRGNS
EDSIEVLSTTESIFPEDLTAITEEEAEQLHQNIHLENEEETETETELHNHTLENGRGSES
EPPVQNHDCCGDRGAPPRQMKVNGGVTVKEEVVTERLKIDGATKTNTTDKTLRTSQDEKV
GTKWFKADKSVPDLHMNRGPVPGVAEVDRWTPPCAPPRLLSLDEGSDCNSVAGSTGAPSP
TRNIWSLKRKRKAALRALRFIKHNSFSQHAVFCLLSGRPLVVVGADDGQVKKLVEALSLF
LPSPGPEGNAAMSCLSTPLQLTDLLTWRLMGIHRSSSSSYSSITHSLTRYSRYLALLDLD
HRTLSCPSYSGSLISRMVDPHTGIGRGLTFLLHLQSCLSALVNQALLYTFVPGTGGEERG
AERAEFLFTRGFCSSEQDVKVLDFLSNLIKERCVRRGPPVFRFSYSSLQLHRNTHAA
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtctccggacctgctggccttcaccggcccggaggagttcgatgagggagaa
gaagagcaggaggctgcggttctgccggaggagctgtcggtgccgctgctccccccgtgc
cgcccctggagctcctccgcacacttccaccgagacttcgtcctggtggccgagttctcg
gagcaggttggtccgaagcccgtgctgaccataccggacgaccccgcggtcatcggctct
tttgatctcaaccacttctccgttcgtatcatgtctgtggactaccaggcgtctggaccc
ctcccctcctcccccgcctcccctggcccccggctgaacttcagcgaggactccaaagtc
atcttgggagattcagcggaagatgctttcgcgtacgttcagtacctgactctgtatgac
ctgcaggcccggggcatggtgcgtcctttctgtatggcctacgtgtgttctgatcagtcc
aagctgatggagaacttcgtcgaactgtcgtcctgcttctctcaggcgtccgacagcctg
aagacaggaaacagacaggcgttttcaatggagctgcagagaaaactcactgatctggag
tacacacgcctaactttgctgcaggacacagaacagccgtcttcggtgcacgtgtcccca
gcagatggagacgtggcccaagaccttgaagctgtggaacgttcgatccagaatcacaga
gatctccttcgccaggtcacatcctaccccaacaggaagctccaacagcctgactttctg
ccctacgacccggccgactccctcaccgatcccacgccgttgcagccacctgagcggcgt
ccttccaccttcaccttcagctccgccctcagccccagcaggtctgagtgctctctgaag
cccctgcaggagctctgcaacgcctactttctcagcctcatgcaggagcagctggcggac
accgagcgccgccttcaaggagaccgcagtgtcctgcgaacttcctgcgtgtcaggctca
ctatacaggaagctaactctcaccaacttcctgtttgagctcggaagcaaagggaacgag
gaggaagagcaggagagctcggaggcagagttacagaaggtgatgaagagcagcgccggg
gtgtcacggtcagaacctgtgagtctggagtctttctgctcctgcgtggaggaaatacca
ataaaactagagcaggaggagaccatgacctctgacctcactgttctcttggacctgaca
ggaagtgtgagcagcagtgacagcatcgaggtgctgggcactgagaaatcctatcataca
cagtgtgtagacggaggagcagaaggtggagcacaaacacagatggaggccactcccagg
cgaatgccgtcagacgcaacggtcaaatgcgtgcgggcgtacgcacgacggggcaacagc
gaggacagcatcgaagtcctgagcaccacggagtccatcttccctgaggacctcaccgcc
atcacggaggaagaagccgagcagctgcatcaaaacatccacttagaaaatgaggaagaa
acagagactgaaactgaactccataaccacacactggagaacggacggggaagtgaaagt
gaaccgcccgttcagaaccacgactgctgtggtgacagaggagcgcccccgcggcaaatg
aaagtgaacgggggagttacagttaaagaggaagtagtaactgagcgtctgaagatcgac
ggagccacaaaaaccaacacaactgacaagacactcagaacatcacaggatgaaaaagtt
gggacaaagtggtttaaagctgacaagtcggtacctgacctccacatgaaccgtggcccc
gtccctggcgtggcggaggttgaccggtggactcccccctgtgctccccccaggctgctc
agcttggacgaagggtccgactgcaacagcgtcgcaggctccacaggagctccgtccccg
actcggaacatctggtcgctgaagaggaagaggaaggcggctctcagagccctcaggttc
atcaaacacaactccttctcccagcatgccgtgttctgtctcctgagtggccgtcccctc
gtcgtggtcggggcagacgacggtcaggtgaagaagctggtggaggctctgagtctcttc
ctgccgtctcctggtcctgaaggaaacgctgcgatgtcatgtctgtccacgccactgcag
ctgaccgacctgttgacctggaggctgatgggaatacacaggtcatcgtccagttcttac
tccagcatcacccactctctgacccgctacagtcggtacctggccctgctggacctggac
cacaggactctgagctgtccgtcatactcgggctccctcatcagcagaatggtcgaccct
cacacgggcatcggccgcggcctgaccttcctgctgcacctgcagagctgcctgagcgct
ctggtcaaccaggctctgctctacacctttgtcccagggaccgggggggaggagaggggg
gcggagagggcggagttcctgttcacgcgtggcttctgcagcagcgagcaggacgtgaag
gtgctggacttcctgtccaacctcattaaagagcgttgtgtccgacgtggacccccggtt
ttcagattctcctacagctcgctgcagctccacaggaacacacacgcagcgtag
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