Cynoglossus semilaevis (tongue sole): 103383992
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Entry
103383992 CDS
T04866
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03272
Virion - Hepatitis viruses
csem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
103383992
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103383992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103383992
Membrane trafficking [BR:
csem04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103383992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
hEGF
EGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
103383992
NCBI-ProteinID:
XP_008315569
UniProt:
A0A3P8VL57
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Position
9:complement(13160824..13172127)
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AA seq
889 aa
AA seq
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MKETENTSRSSKEGRRMFGMRTTLTTLSTLCCLLMLIHGSPAGAAFTCSSSQFTCGNKRC
ITQRWICDGTDDCGDGTDELPAACESKTCRESEFNCGLPRNQCIPGGWHCDGKADCDNGA
DETNCEAKQCSSDEFQCANGQCVSRTYLCDRDNDCSDGSDEASCPKPTCNPQSFQCNNSV
CVPALWRCDGDEDCADGSDEWSQNCEGKRPKNTTASCRDHEFQCANGECIHSSWRCDRGV
DCLDGSDEVNCNFTACRLDEFQCNDGTCIHGSRQCDKKSDCKDLSDEIGCDTDIVCEGPT
MFKCSSGECVSMDKVCDTKRDCVDSSDEPVEKCGNNECLTGNGGCSHICTDLKVGYNCSC
PSGLSLNSDMKTCEDIDECSQPDTCSQICINLPGSYKCDCKNGYQIDPATKTCKAELGAV
PTLYFTNRHEVRKLTIDRSEYAQVISLLKNAVALDMDMLERTIFWSDLSLKTIYRSNIDV
ASNSSQHSVVIGSGIEAPEGIAVDWIQKNIYWTDNVLKTISVATTDGSKRKTLISENLEK
PRAITVDPVNNFMYWTDWGQQAKIEKSGLNGADRVILVEDNIVWPSGITLDIVNQRLYWV
DSKLHTLSSIDVNGGTRHTIILNSDKLSHPLSLTVFEERVFWIDAAKGAVYSANRLTGNQ
ITELAVDLDHPEDIILYHDLKQPNNPNWCSEGSTVNGGCEFLCLPAPQINEHSPKYTCAC
PDHMSMGLDMRTCVTAVPPEKDDGDASLPSTDKPKPTTPPRLVPATTTTTTVRPDNKLAS
TKQVVATEKPEQPAASAQGDRLAAVPTEAPPSHPVALYAVLPIMVIALLGSVSVCLWRQW
RMKSANTIFFDNPVYQKTTEEEVHIGRNSSDGYLYPQRQMLSMEDMDSP
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacagagaatacatccagatccagtaaagagggacggaggatgtttgggatg
cggacgacactaacaacactgtccacgttgtgctgcctgctgatgctgattcatggttct
ccagccggtgcagcgttcacatgcagctcgtctcagtttacatgtggaaataagaggtgc
attacccagaggtggatctgtgacggaacagacgattgtggtgatggaactgacgagctg
cctgcagcctgtgaatccaaaacttgtagggagtcagagttcaactgtggcctccctcgg
aaccagtgcatcccaggaggctggcattgtgacgggaaagctgattgtgacaacggagct
gatgagacaaactgtgaagccaaacagtgcagctctgatgagtttcagtgcgccaatgga
caatgtgtatccagaacctacctctgtgaccgtgacaacgactgctccgacggttcagac
gaggcctcctgccctaagcccacctgcaacccacaatcattccagtgcaacaactccgta
tgtgtcccggctctgtggcgctgcgacggagacgaggactgtgcagatggatctgacgag
tggtcgcagaattgcgagggcaagcggcctaaaaacacgacagccagctgtagagatcac
gagtttcagtgtgctaacggagaatgcatccacagcagctggaggtgtgacagaggtgtg
gactgtctggatggatcagacgaggtcaactgcaatttcactgcatgccgtctagatgag
tttcagtgtaatgatggcacgtgtatccatggcagccgacaatgtgacaaaaagtctgac
tgcaaggatcttagtgatgagattggctgcgacacagacatcgtatgtgaaggtccgacc
atgtttaaatgtagcagcggagagtgtgtcagcatggacaaggtgtgtgacacaaagaga
gactgcgtggactcctctgacgagcctgtggaaaagtgtggaaacaacgagtgtctgaca
ggaaacggcggctgctcccatatctgcaccgatctgaaggttggctacaactgttcctgt
ccttctgggctcagcctgaactcagatatgaaaacgtgtgaagacatcgatgaatgttct
caaccagacacttgcagtcaaatctgcataaacctaccaggaagctacaagtgtgactgc
aaaaatggctaccaaatcgaccctgcgaccaaaacctgcaaggctgaattaggcgccgtg
cctacgttgtactttaccaacagacacgaggtgaggaaactgacaatagaccgcagtgag
tacgctcaggtgatctcactgctgaaaaatgcagtggcgttggacatggacatgctggaa
aggacaatcttctggtctgatctgtccctgaaaacaatctacaggtccaacattgatgtg
gccagtaactcctctcagcactccgtggttattggaagtggaattgaagcccccgaaggc
attgcagtcgactggatccaaaaaaacatctactggacagataacgttttgaaaaccatc
tctgtggccaccaccgatggcagcaagaggaaaaccctcatctccgaaaacctcgaaaag
ccaagagcgatcaccgtggacccagtcaataacttcatgtactggacagactgggggcag
caggctaagatagagaagagtggcttgaatggagcagatcgtgtgattctggttgaagat
aacattgtgtggcccagtggcataaccctggacattgtcaaccagcgtctgtactgggtg
gactccaagttgcacacactgtccagcatcgatgttaacggagggacacgacacactatc
attttaaacagtgacaaactttcccacccactctccctgactgtctttgaggagagagtt
ttctggatagacgcagccaaaggtgctgtttacagtgccaaccgtttgacaggaaaccag
atcactgagctggctgtggatctggaccatccagaggacattatcctgtaccacgacctc
aagcagcccaacaatccaaactggtgcagtgaaggcagcacagtgaatggaggctgtgag
ttcctgtgcctcccggcccctcagatcaatgagcattctccaaagtacacctgtgcctgt
ccagaccacatgagcatgggcctggacatgaggacatgtgtgacagctgtccctcctgag
aaagacgatggtgatgcttcgctcccatctacagacaaaccaaagccgactacacctcca
cggctcgttcctgccaccacaactacaaccaccgttagaccagacaacaaactggcatct
accaaacaggtggtggccacagagaagccagaacagcctgctgcctctgctcaaggtgac
agactggcagcagtgcctacagaggccccgccctcccaccccgtcgctctctatgctgtg
ctgccaatcatggtcattgccttgctgggctccgtatcggtgtgtctgtggagacaatgg
cgtatgaagagcgccaacaccatcttctttgacaatcctgtgtaccagaaaaccacggag
gaagaggtgcacatcggcaggaacagctccgacggctatctttatcctcagaggcagatg
ttgagcatggaggacatggacagtccttga
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