KEGG   Cynoglossus semilaevis (tongue sole): 103387644
Entry
103387644         CDS       T04866                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103387644 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csem03041]
    103387644 (smndc1)
Spliceosome [BR:csem03041]
 Complex A
  U2 snRNP components
   U2 related factors
    103387644 (smndc1)
 Complex B
    103387644 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    103387644 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 103387644
NCBI-ProteinID: XP_008320606
UniProt: A0A3P8WIJ3
LinkDB
Position
12:14890755..14903845
AA seq 235 aa
MSDDLMKQLSSYKAQLQQVDVALSTDPENEDLQKLHKDLQEVIDLTKDLLASQPSDSTSS
KDGTEAVPQKKSWKVGNRCMAVWSNDGQVYEAEIEEIDRENGTAAVTFIEYGNAEVIPLQ
NLRAAEEGKSSEDGKPKSKKEKMAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQFNN
KAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 708 nt   +upstreamnt  +downstreamnt
atgtcggacgacttgatgaaacaactgagcagctataaagcccagctgcagcaagtagac
gttgcgttatcgacagatcctgaaaatgaagatctccaaaaactccataaagacttgcag
gaagtcatcgatttgacaaaagacctgttggcttcacagcctagtgatagtacttccagt
aaagatggcacagaagctgtcccccaaaagaaaagctggaaagtcggaaacagatgtatg
gctgtgtggagtaacgatggacaggtgtatgaggccgagattgaagagatagatcgagaa
aatggaactgcggctgttacctttattgaatatggcaatgctgaagtgatccccctgcag
aacctcagggcagcggaggagggcaaaagctctgaggacggaaagcccaaatcaaagaaa
gagaaaatggctgagcagagagagtacaagaagaagaaagcccagaagaaggtgcagagg
atgaaggaattggagcaggagagagaagatcagaagtcaaagtggcagcagttcaacaac
aaagcctactcaaaaaacaagaaaggccaagtaaagagaagcatattcgcgtcaccagag
agcgtaaatggaaaagttggagtgggaacatgcggaatcgctgacaagcccatgactcag
tacaacgacacgtccaaatacaacgtcagacatctaatgccacaatga

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