Cynoglossus semilaevis (tongue sole): 103388961
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Entry
103388961 CDS
T04866
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
KO
K06752
MHC class II antigen
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04145
Phagosome
csem04514
Cell adhesion molecules
csem04672
Intestinal immune network for IgA production
csem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103388961
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103388961
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
103388961
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103388961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csem04147
]
103388961
Exosome [BR:
csem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103388961
Exosomal proteins of epithelial cells
103388961
Exosomal proteins of breast milk
103388961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
C2-set_2
ig
DUF1646
Motif
Other DBs
NCBI-GeneID:
103388961
NCBI-ProteinID:
XP_008322425
LinkDB
All DBs
Position
13:complement(20438764..20444007)
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AA seq
311 aa
AA seq
DB search
MLCCGLLDWYLETNIGKLNNKGLQYLTCNMGPNLFLLLLLPLPLCSQGKHLLRFLTLCQR
QEESDGQYDIEFDGDQLLYVEPSSYMIFQRLPEFADQWIPDPSLRKEAYLDLGTCKYNLG
NIPEVVDSPTSMIYSKEYIEIGVPNTLICFVNEFHPPEINIIWTKNGELVNQSYISQTQY
YSNSDYTFRTSSYLRFTPQENDIYACGVEHMSLQTPLTRFWEVETDELKNSQNVETALCV
CGVILGLMGGYIGLWFIRKASKSCRRSPASISPYLITQTISMTWLTTFTKHSLQVFLYSF
CLSTPSPTSFV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctgcggcctcctggattggtatttggaaacaaacatcggaaaattaaacaac
aaaggtttgcagtacctgacatgcaacatgggaccgaacctgttcctgctgctgctcctt
cctcttcctttgtgcagccaaggtaaacatttacttcgctttttgaccctttgccagcgg
caggaggagagtgatggtcagtatgacattgagtttgatggcgatcagcttctctatgtc
gaaccttccagctacatgatctttcagcgcctcccagagtttgcagatcagtggatccct
gatcctagtctgcgcaaagaggcctatttggacctcggtacctgcaagtacaatttagga
aatatccctgaagttgtcgacagtccgacatctatgatctactcgaaggagtacatcgag
atcggcgtgcccaacactctcatctgcttcgtcaatgaattccacccacctgagatcaac
atcatatggaccaagaacggggaactggtgaaccagagttacatcagtcagactcagtac
tactccaacagcgactacacttttcgcacctcctcctacctcagatttactccccaggag
aatgacatctatgcctgcggtgttgaacacatgagcctgcagacaccactcactaggttc
tgggaggttgaaactgatgaactgaagaacagccagaatgtggagactgcgctgtgtgtc
tgtggtgtgatcttgggcctgatgggaggttacatcggtctgtggttcatcaggaaggcc
agcaagtcctgcaggagatcacctgcctccatctcaccctatcttattactcaaaccatc
tccatgacatggttaacaacattcacaaaacattccttacaggtcttcctctactccttt
tgcctgtcgactccatctccaacatcctttgtctga
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