Cynoglossus semilaevis (tongue sole): 103390943
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Entry
103390943 CDS
T04866
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103390943 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103390943 (kdm2a)
04121 Ubiquitin system [BR:
csem04121
]
103390943 (kdm2a)
03036 Chromosome and associated proteins [BR:
csem03036
]
103390943 (kdm2a)
Enzymes [BR:
csem01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
103390943 (kdm2a)
Transcription factors [BR:
csem03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
103390943 (kdm2a)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103390943 (kdm2a)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
103390943 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
103390943 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
LRR_6
Cupin_8
PHD
C1_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
103390943
NCBI-ProteinID:
XP_008325252
UniProt:
A0A3P8VEP4
LinkDB
All DBs
Position
15:complement(10327047..10338316)
Genome browser
AA seq
1277 aa
AA seq
DB search
MEDPHTRYSKRLRTGTRRRYEDDAISDDEIEGKRMFDLDEKLQCERFGTNLVKHMEGKDF
TFEYIQREGLREPIIFNTPDGLGLEMPDPDFSVSDVKVFVGSRRIVDVMDVNTQKGIEMS
MAQWGRYYETPPSERQKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQT
DSTNAIMDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLE
MYENWVLSGKQGDIFLGDKCYDCQRIQLLQGNTFIIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPTKFRYPFFYQICWYVLERYLYCLTKTSHLTPEFQKYSLGIG
LTKSDIDPSPGIDNSSGVEGEPDKPEIKGEAEEENEKEEEKEEEEEEAPLTKFQLTPFEL
EGLWNLVGKLEELPPHKKCVPAGIQNPPALLEDIKKILMEHASDDPKLSFTGKPIVKWPK
RPSWYHPPAPPPPILYRPRPVSVPFKSKSKKHSNISALRRRRVRCKRCAGCLRYECGSCH
ACQDMRKFGGSGRMKKGCIMRQCLTPALPNTARCAICREGESDETGLSGNSLMECSVCSQ
IAHRQCIKEPGEGKINKDLPSCWECPKCYQGKSSGSESSSDEESGESEASSSLGARQNKP
QSRPTAPPPSQKLLLQHEENRKRASALELRLKKKMKLERSKLLVKQSSLDRSSRLLSSRL
LSRLRSPTSRLSQNRGRGSMWMSSSPGGTRSFQQLQQQSSHSLLLQSKGEPRRGKGRGVR
LRGGGAGRVGSRSHGDLEEESEDSSSSSTNSSSSSEEEEEREESNMGGGDKENQPQSEKG
VTKDGEEEAMEAANANCPEEEEEEMEQEGQTKDKDGSYQKVTLQRPSKAKQDPSAIVPKL
EAITPQTAPSTIHKPIRILPRPPIRNRGPCPNQHSSRRTPPHLRSGHAATHNPHPERPEA
TKKTKTSRSAKMNNGASCSSSSDFTHPRIPLSTLQGGGGEADRDSGLSGPGCERDVWVSV
FRYLSRADLCVCMAVCKNWYKWCLDKRLWTRIDLSVKCTVTPQALTGIIKRQPVSLDLSW
TNISKKQLNWLVGRLPGLKDLMLAGCAWSSISALCSSAGPLLRSLDLRYADGVKDPQIRD
LISPPGCDNRSQLRTVQCLRLAGLDISDPTLRLVIRHMPHLTKLDLSHCNSLTDNSINLL
TAVGSSTRNTLTELNLGGCSKLTDTCLKYLRRFSCISLLDLRGCEGVSRKACEAFISELS
VNTLYCLSDDKLIQRIS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcctcatacacggtacagcaaacgcctgcgaacaggtacgcggcgacgatat
gaagatgatgcgatctcagatgatgaaattgaaggaaaacgcatgtttgacctggatgaa
aaactgcagtgtgaaagatttggcaccaatttggtcaaacacatggagggcaaagatttt
acatttgagtacattcagagggaagggctcagggaacccattatctttaacacaccagat
ggccttggcttagaaatgccggaccctgatttcagtgtgagtgatgtcaaggtgtttgtt
gggagtcgacgcatcgtggatgtgatggacgtgaacacgcagaaaggcatcgagatgtcg
atggctcagtgggggcgctattacgagacgccaccatcagagaggcaaaaactgtataat
gtcatcagtctggagttcagccacaccaaactggagaacctcgtcaaacgaccagcctcg
gtggatctaattgactgggtggacaacatgtggccccgacatttgaaggagagacagaca
gactctactaatgccatcatggacatgcattaccctaaagtacagaagtactgtctgatg
agtgtgcagggctgcttcactgacttccacattgactttggaggcacttcggtctggtat
cacatactccgaggaagaaaggttttctggctgattccacccacaccacagaacctggag
atgtacgagaactgggttttgtcaggaaagcagggagacatctttctgggggacaagtgt
tacgattgtcagaggatacaactcctccagggcaacacctttataatcccatcaggttgg
atccatgctgtgtatactccagaagacacattggtgtttggtggaaattttctgcacagc
ttcaacatcccaatgcagctcaacatttacagcattgaggatcgcacacgagtgccaaca
aagttccgctatcctttcttctatcagatctgctggtacgtcctggagagatacttgtac
tgcctcactaaaacctcacacctcacacctgagttccaaaaatactcccttggcatagga
ctgaccaagagtgacatcgatcccagtcctggaatagacaactccagtggagttgaaggt
gagcctgacaaaccagagatcaagggagaagccgaagaagaaaatgaaaaagaagaagaa
aaagaagaagaagaagaagaagctcctcttaccaaatttcagctgacgccctttgagctg
gagggactctggaaccttgttgggaagctggaggagctgccaccacacaaaaaatgtgtc
cctgcaggaatccagaatccaccagccttgcttgaggacataaaaaaaattctgatggaa
catgccagcgatgaccctaagctgtccttcactggaaagcccattgttaagtggcccaaa
aggccgtcatggtaccacccaccagccccacctccacccatcctttaccgtcctcgccca
gtctctgtgccgttcaagtccaagagcaagaagcactccaacatctctgccttgaggcgt
aggcgagtcagatgcaagcgctgtgctggatgcctcaggtatgagtgtggctcctgccat
gcctgtcaggacatgaggaagtttggtgggtctggacgcatgaagaaaggctgcatcatg
agacagtgtctaacgccggcattacccaatactgctcgatgtgccatctgtcgagaaggc
gaatcagatgaaacaggtctcagcggtaactcactcatggagtgttctgtctgctcacaa
attgcccatcgtcagtgcatcaaggaacctggtgaaggaaagatcaacaaagatctgcca
agctgctgggaatgccccaaatgttaccaaggcaaaagttcaggatcagagtcttccagt
gatgaagagagtggagagtcagaagcctcatcctctttgggggcaagacagaacaaacct
cagtcaagacccacagcgccaccaccttcgcagaagctgttactgcagcatgaagagaat
cgaaaaagagcaagtgcactggagctcagactaaaaaagaagatgaagctcgagcggagc
aaactcttagtgaaacagtcatcactagatcgttcttcccgacttctaagttccaggctc
ttgtctcggttgcgctctcccaccagcaggctgtctcagaacaggggtcgaggctccatg
tggatgagcagctccccaggaggaacaaggtcattccagcagctgcagcaacagtcttct
cacagtctgctacttcagtctaaaggagaaccccgtagagggaagggtagaggtgtaagg
ctgcgaggaggaggagcgggaagagttggaagcagaagccatggagaccttgaggaggag
agtgaagatagtagcagcagcagcactaacagcagcagcagcagtgaagaggaagaggag
agggaggagagcaacatgggaggtggtgataaagagaaccagcctcagtcggaaaaagga
gtcaccaaagatggagaggaggaagccatggaggcggccaacgcaaactgtccagaagag
gaagaggaggagatggagcaggagggacaaacaaaggacaaggacggctcctatcagaaa
gtgacgctccaaaggccaagcaaggccaaacaggacccgtcagccatcgttcctaaactg
gaggccatcacccctcagactgctccttccacgatacacaaaccgataagaatccttccc
agaccaccaatcagaaatcgagggccctgtcccaatcagcactccagcagacgaacaccc
ccacatttacgcagtggacatgcagctactcataacccccatccagagagaccggaggcc
actaaaaaaacgaagactagcaggtcagccaaaatgaacaatggagcttcctgttcttca
tcatcagactttacacaccccagaatccctctgtccacgctgcagggaggaggcggtgaa
gcagaccgggacagtggactgagtggcccagggtgtgagagggatgtatgggtgtctgtc
ttccgctacttaagtcgagcagatctgtgcgtctgcatggctgtgtgcaagaactggtac
aaatggtgtttagacaagcggctttggacgcggattgacctgagtgtcaagtgcactgtt
actcctcaggccctgaccggcatcataaaaagacagcctgtgtcactcgatctctcatgg
actaatatctcaaaaaagcaactcaactggctggttggccgactgcccgggctgaaggat
ctaatgctggcaggatgcgcgtggtcgtctatatctgccctctgctcctctgctgggcct
cttctccgttccctagatctgcgatatgcagacggtgtcaaagaccctcagatcagggat
ctcatcagtcctccaggctgtgacaatcgcagtcagctgcggactgtgcagtgtttgcga
cttgctggcctggatatcagtgaccccaccctacgcctggtgatccgtcacatgccccat
ttaacaaagctggacctctcccactgcaacagcctcaccgacaactccatcaacctgctg
acagcagttggttcatccaccagaaacacactcacagaactgaacctcggaggctgcagt
aaactgacagacacgtgtctgaagtatctccgccgcttctcttgcatctcacttctcgac
ctgcgaggttgtgaaggggtttcccgtaaggcctgcgaggcctttatttccgagctgtcg
gtcaacacactctactgcctatcagatgacaagctgatccagaggatatcctaa
DBGET
integrated database retrieval system
