Cynoglossus semilaevis (tongue sole): 103393137
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Entry
103393137 CDS
T04866
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103393137 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csem03041
]
103393137 (eftud2)
Spliceosome [BR:
csem03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103393137 (eftud2)
Complex C
U5 SnRNP specific factors
103393137 (eftud2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
103393137
NCBI-ProteinID:
XP_008328220
UniProt:
A0A3P8WNT3
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All DBs
Position
17:9942576..9953489
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLEAEDRDIDEGDDDDEDEPADADDDAPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKSRRFTLMEQELPATVYDMEFLAD
LMDGPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRISDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYTTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
SSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFADMCVQHIPSPQGGARAKIEHTYTGGLDSDLGDAMAECDPEGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatctttatgatgagtttggaaactacatcggtccagagctggactctgat
gatgatgaagatgatcttgaagcagaggacagagatattgatgagggtgatgacgacgat
gaagatgaacctgctgatgctgatgatgatgccccaggcatggaggtggttctgcatgag
gataagaagtattatccgacagcggaggaggtttatggaccagaagtagaaactattgtc
caggaggaggacacccaacctctaactgagcccatcatcaaacctgtaaagagccgacgg
tttactttaatggaacaagaattgcctgctacagtttacgatatggaattcctggcagat
ttgatggatggtccagagttgattcgtaacgtcactctctgtggtcaccttcaccacggc
aagacctgttttgttgactgcctaattgaacagacacacccagaaatcaggaagagagac
gatgtggatctccgatacacagacatcctcttcacagaacaggagagaggagttggtatc
aaaagtactccagtcacaatggttctgccagactccaggggcaaatcgtatctcttcaac
atcatggatacaccaggtcatgtgaacttctcagatgaggtcacgtccagtatccggatc
tcagatggcattgtcctcttcatagatgctgcagaaggagtaatgctaaacactgagcga
ctcatcaaacatgcagttcaggagcgaatggccatcaccatctgcatcaacaaggtggac
cggctcattgtggagctcaaactgcctccgacagatgcatattataaactgcgccacatc
gtcgatgaggtcaatggtttgctcagcacttatactacagatgagaacttggtcgtgtct
ccactgctcggaaatgtgtgctttgccagctcccagtacagtatctgcttcactctcggc
tcctttgcaaagatttactctgacacttacggtgacattaactataatgagtttgccaag
aggctgtggggagacatttacttcaaccccaaaacacggaagttcacaaagaaagctccc
agcagcaactctcagcgcagttttgtcgagtttgttctggagcctctctacaagatcctg
tcacaggtggttggagatgtggacacgtctcttcctcgagttctggatgagttaggtatt
cacctgactaaagaggagctgaagctgaacatcagaccgttgttgaggctggtctgcaat
cgtttctttggggaattcactggctttgctgacatgtgcgttcagcacataccatcccca
caaggtggcgccagggccaagatagagcacacctacacaggaggtctggactcagatctg
ggggatgccatggcagagtgtgaccctgaaggccccctgatgtgccacaccactaagatg
tacagcactgaagatggggttcagttccacgcctttggcagagtgttgagtggcaccatt
caggcaggtcagccggtcaaagtgttaggagaaaactacactctggaagatgaggaggat
tctcaggtctgcaccgttggacgtctgtggatttctgttgccagatatcagattgaagtg
aatcgagtccctgccggcaactgggtcctgatcgaaggctgcgatcaacccatcgtcaaa
acagccacaatcacagaacccagaggcaacgaagaggcccagattttccggcctctgaag
ttcaacaccgcgtcagttatcaagatcgcagtggaacctgtcaacccgtcagagcttcct
aaaatgcttgacggactgaggaaggtcaacaagagctatccatccttaaccacaaaggtg
gaagaatctggggagcatgttatcttgggcacaggagagctttacctggactgtgtcatg
cacgacctgcggaagatgtactctgaaatcgacattaaagttgccgacccagttgtgact
ttctgtgaaacagtagttgaaacatcgtccctcaagtgctttgctgaaacgccaaacaaa
aagaataaaatcaccatgatcgccgagcccctggagaagggtctggccgaggacatagag
aacgaagtggtgcagatcacatggaacaggaagaagctgggagagttctttcagacaaag
tacgactgggatctgttggccgccaggtcaatctgggcctttggaccagacacaacagga
cccaacattctggtagatgacactctgccttctgaggttgataaagctctgctgggctcg
gtcaaagacagcatcgtccagggtttccagtggggaaccagggagggacctctgtgtgat
gagcccatcaggaatgtcaagtttaagatcctggacgctgtcatagctcaggagcctctc
cacagaggagggggccaggtcatccccacagccaggagagtggtctactctgctttcctc
atggccacaccaaggttgatggagccgtattattttgtggaggttcaggctccagcagat
tgtgtctctgctgtgtacaccgtgttggcaagaagaagaggtcacgtgacccaggacgcc
cccattccaggctcccccctctacaccatcaaagctttcatcccagccatcgactcattc
ggcttcgagacggaccttcgcacccacacacaagggcaggccttcgccctgtctgtgttc
caccactggcagattgtacctggtgaccctctggacaagagtattgtgatcagacctctg
gagcctcagcctgccccacacctggccagagagttcatgatcaagacccggagacgcaag
ggcttgagtgaggacgtgagcatcagcaagttcttcgacgatcctatgttgttggagttg
gccaaacaggatgtggtgctgaactacccaatgtga
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