Cynoglossus semilaevis (tongue sole): 103393304
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Entry
103393304 CDS
T04866
Symbol
actb
Name
(RefSeq) actin, beta
KO
K05692
actin beta/gamma 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03082
ATP-dependent chromatin remodeling
csem04145
Phagosome
csem04210
Apoptosis
csem04510
Focal adhesion
csem04520
Adherens junction
csem04530
Tight junction
csem04810
Regulation of actin cytoskeleton
csem04814
Motor proteins
csem04820
Cytoskeleton in muscle cells
csem05100
Bacterial invasion of epithelial cells
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103393304 (actb)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103393304 (actb)
09143 Cell growth and death
04210 Apoptosis
103393304 (actb)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103393304 (actb)
04520 Adherens junction
103393304 (actb)
04530 Tight junction
103393304 (actb)
09142 Cell motility
04814 Motor proteins
103393304 (actb)
04820 Cytoskeleton in muscle cells
103393304 (actb)
04810 Regulation of actin cytoskeleton
103393304 (actb)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103393304 (actb)
05100 Bacterial invasion of epithelial cells
103393304 (actb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103393304 (actb)
03019 Messenger RNA biogenesis [BR:
csem03019
]
103393304 (actb)
03036 Chromosome and associated proteins [BR:
csem03036
]
103393304 (actb)
03029 Mitochondrial biogenesis [BR:
csem03029
]
103393304 (actb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csem04812
]
103393304 (actb)
04147 Exosome [BR:
csem04147
]
103393304 (actb)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103393304 (actb)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
103393304 (actb)
Chromosome and associated proteins [BR:
csem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
103393304 (actb)
NuA4 complex
103393304 (actb)
Chromatin remodeling factors
BAF complex
103393304 (actb)
PBAF complex
103393304 (actb)
GBAF(ncBAF) complex
103393304 (actb)
SWR1 complex
103393304 (actb)
Mitochondrial biogenesis [BR:
csem03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
103393304 (actb)
Cytoskeleton proteins [BR:
csem04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
103393304 (actb)
Exosome [BR:
csem04147
]
Exosomal proteins
Proteins found in most exosomes
103393304 (actb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
103393304
NCBI-ProteinID:
NP_001295108
UniProt:
A0A0A7DHF9
LinkDB
All DBs
Position
17:complement(11978794..11982960)
Genome browser
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaatcgccgcacttgttgttgacaacggatccggtatgtgcaaagccgga
ttcgctggagatgacgccccacgtgctgtcttcccctccatcgtcggtcgccccaggcat
cagggagtgatggtgggtatgggccagaaggacagctacgttggtgatgaagcccagagc
aagagaggtatcctgaccctgaagtaccccatcgagcacggtattgtgaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
caccccgtcctgctcacagaggctcccctgaaccctaaagccaacagggaaaagatgacc
cagatcatgtttgagaccttcaacacccccgccatgtacgttgccatccaagctgtgctg
tccctgtatgcctctggtcgtaccaccggtatcgtcatggactccggtgatggtgtgacc
cacacagtgcccatctacgagggctacgccctgccccacgccatcctgcgtctggacttg
gccggccgcgacctcacagactacctcatgaagatcctgacagagcgtggctactctttc
accaccacagccgaaagagaaattgtgcgtgacatcaaggagaagctgtgctatgtcgcc
ttggacttcgagcaggagatgggcaccgctgcctcttcctcctccctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggtaatgagaggttccgttgcccagaggcc
ctcttccagccttccttccttggtatggagtcctgtggcatccacgagaccacctacaac
agcatcatgaagtgtgacgtcgacatccgtaaggacctgtatgccaacactgtgctgtct
ggaggtaccaccatgtaccctggcatcgccgacaggatgcagaaggagatcacagccctg
gctccatccaccatgaagatcaagatcattgccccaccagagcgtaaatactctgtctgg
atcggaggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggcccctccatcgtccaccgcaaatgcttctaa
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