Cynoglossus semilaevis (tongue sole): 103394921
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Entry
103394921 CDS
T04866
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103394921
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103394921
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103394921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
TPR_BSK1_C
zf-rbx1
TPR_2
TPR_1
zf-C3HC4
zf-C3HC4_2
TPR_16
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_11
TPR_17
TPR_11
zf-ANAPC11
zf-RING_Vps41
TPR_6
ANAPC3
zf-HC5HC2H
TPR_9
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
103394921
NCBI-ProteinID:
XP_008330618
LinkDB
All DBs
Position
19:complement(4223636..4239784)
Genome browser
AA seq
1706 aa
AA seq
DB search
MSYLDFQPVCAEGMHGYMTIRPLEEVLDQWMAIPSETKKVAGQKMKMFTFWLPILLHQDE
SNPVVTWAVDIGVIDELDNDNLCLKNIRRIEILEEIFKTVEAGIRKRNFLKQFFRLIEMF
NLNSPDVFPVALQWLERAGEPTIYQLLEEFGPFAFITLQVIFTEYARYVRRMGMNLERTM
NELMVRPSEDIIEKSEELKKMGNLKFKNNQYEDAVKFYSRAIKYYPENHITYGNRALCYI
RCEKYLKAIGDGKRATLIEPSWAKGHYRYCEALLFLGEVKKAIEANDLAQKLCRNDHAGL
KDLEQQKLKIIGMLEEHMGCKPKTKNKRPTSINRAEETNSQQQKRGIKKSLTQQSQDSEA
KMNKPSDKKEQAAKMNNKKDSKSSKSEVPLKNGEVESSTTVKKKMDKNVQPKEEKTPGNR
ASFCKELKSVVEDAYTALTNLCSRNAEQAFSKALAILETNTPKKLGLSSLDVLLLLFGRA
SALTEIGQLQELSEAKKVIEKIKSSEERTFQCLVYYAFGKVYLKENRFAVALEQLSDSLQ
MLKNQIFPGKLTWPLSKEIVKETQQDYLKERLESFIELCRFPPVPDAVCRFEKCNTSSKV
EIYLTDPDFKGYIRISCCQRCSVEYHVTCWKTLRTLTFFEKNDKDFLHETCLTPDCVGRI
CSVQIISPTGLLKCEFKDTVLKPQTTKKLRVNQKCSSLKALKSKAEHKLKRKQMKPSVQE
DQTTNDESLQQTQEGASQIQHKSWLRYRDPVLLQISQTMDLLMETKSLQVSVLVESLKPW
LELDSSRGNQVADRMLNWQNESLETFSQAVELLLERKNRVWARVLIHLLSNSEDLNPKVS
KWACQLNDTGLDAARNFIERYAAQLEELDLSLLLNFGPLQDMFIMNLKVNSDIFSTIGVT
VTDYLQQASLHHMRLFIWTLEEHRDNYVACHTILDEYFDMDGHCSVLKKSDENQNNSPLK
TKSKNRKKKQKSSDTKGLYGFPLAGTITPREEWDQDFFEDDHLSLLHPVDPFSVPSHLQD
QVADFEQQYNGTCYQSFSKRFLDNHPDKTKEGLYDFFAQILEEHGPLAAEDPLLVGELQY
FPTEAQQKIMKAGGLESFLLESLRFIKMGSCVGLAKQAVILQQAGPGLGLDDLDVILDHE
PISHPSYTQTEIHPILPNPYISEDASGFDLNLNKNAFYYFTKWNNGDSHQQFPYSSFKDQ
SELCVLGTDSAPGVLETDSSDEAAGEGMLRKHAAVQTCQETMSSVAVNTEPHQSLESCQG
DINKKQKTCHRLKQQIQEITRCQSKANTKLKEEIAAIEGDIQNLNATGQVINKELMDLQQ
RLEEDVKKDQKEKKTNQDLLKALKLEVDQVLEQQRSLTQGIREKKILYETKMNDFLELTN
QSAAERMSLEEEINRCKRQCASAARRSNTAQVSTAESSREQGLYSLHRELADAKALLTKV
DEAMHRQSIPGLQVFRNSWNANVQEVERKIANAEVQFKAQIDQVKNGRNVSELPLSTNQT
EPSAQRSSPQVSNVQQPVAAAPGGTAAAAPPQLKQKHQHSTVFEKAMEQLSSIFPDYSRS
DMMRFIQELRSSSGGSFSSMGLQDMVGGVSQLILDHQENLRAARSQAVGRGSPRATPLLL
TAASVWPQVGTQRTVHPSALNVEDPCIICHEDMSPEDVCVLECRHSFHDKCIRSWLKEQS
TCPTCRDHTLLPDDFPQLPGRRRPAP
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatttagactttcaacctgtctgtgcagaaggaatgcatggatatatgaccatc
cgtccactcgaagaagttttggatcaatggatggctatcccttcagagaccaaaaaagtg
gctggacagaagatgaaaatgtttaccttctggcttcccattctattgcaccaagacgag
tctaatcctgttgtaacctgggctgtagatataggtgtcattgatgagctggataatgac
aatctatgtttaaagaacataagaaggatagaaatcctagaagaaatcttcaaaactgta
gaggcaggaattagaaagagaaactttttaaaacaattcttcaggttaattgaaatgttc
aacttgaattcaccagacgtgttcccagttgccttacagtggttggaaagagccggagag
ccaactatctaccagcttttagaggagtttggcccatttgcattcataactctgcaggtc
atcttcactgaatatgctaggtatgttcgaaggatgggcatgaacttggagaggacaatg
aatgaacttatggtccgaccatcagaagatataatagagaaaagcgaggaattgaagaaa
atgggaaacctaaaatttaagaataatcagtatgaagatgctgtaaagttttattccaga
gccatcaagtactatcctgaaaaccacattacatatggaaacagagccctgtgttatatc
cgatgtgaaaagtatttaaaggcgattggtgatgggaagagagccacgctgatagaacca
tcctgggcaaagggccactaccgctattgtgaggctttgttgtttttgggcgaggtcaaa
aaagctattgaagccaatgatttggcacaaaaactttgtaggaatgaccacgcaggactc
aaagacttagaacagcaaaaactcaaaatcatcggcatgctggaagaacacatgggttgt
aaaccaaagaccaagaataaaagacctaccagtataaacagagcagaggaaacgaattca
cagcaacaaaaacgtggaattaaaaaaagcctgactcaacaaagtcaggactctgaggcg
aaaatgaacaagccttcagataaaaaagaacaggctgcaaaaatgaacaataagaaggat
tctaaatcttcaaaaagtgaagtccctttaaagaatggtgaagtggagtccagcaccaca
gtgaaaaagaaaatggataaaaatgttcaacccaaggaggagaaaactccaggcaacaga
gcaagtttctgtaaagagttgaagtctgtggtggaggacgcctacactgctctgaccaac
ctctgcagccgcaatgcggagcaggccttcagtaaggcactggccatactggagaccaac
acacccaagaaacttggactttcctctctggatgtcctgttgctcctgtttggtcgggca
tctgctctcacagaaattggtcaacttcaggaactttcagaagccaagaaagttatagaa
aagatcaagtcatctgaggaaagaacattccagtgtctggtttactatgccttcgggaag
gtgtatctcaaagaaaacagatttgctgttgctctggagcagctttccgactcactgcag
atgctgaaaaatcagatatttcctggaaagctcacctggcctttatccaaagagatcgtc
aaagaaacacaacaagactatttaaaggaacgtttggaaagttttatagaattatgcaga
tttcctcccgttcctgatgctgtgtgtcgatttgaaaaatgcaacacctcttcaaaagtt
gaaatctatttaactgaccctgattttaagggctacataagaataagttgctgtcagaga
tgttctgttgaatatcacgtcacctgttggaagaccctgaggacgttgaccttctttgaa
aagaatgacaaggatttcttgcatgaaacatgtttaactccagactgtgttggtcggatc
tgcagtgttcaaatcataagtccaacaggcctgttgaagtgtgagtttaaagacacagtc
ctgaaaccacagactactaaaaagctgagagttaatcagaaatgttcaagtttaaaggca
ttaaaatcaaaggccgaacacaagctgaagagaaagcagatgaaaccatctgttcaggaa
gaccaaacaactaatgatgagtctctacagcagacacaagaaggagcgtctcagattcaa
cataaatcctggttgcggtacagagatccagttttactgcagatcagtcaaacgatggat
ctgctgatggagacaaaaagtcttcaggtgtcagtcctggtagaaagtctgaaaccgtgg
ctggagctggattcgtcgagggggaaccaggtggctgatagaatgctgaactggcagaat
gagtctcttgagacgttctctcaggctgtggagctcctgttggagaggaaaaaccgtgta
tgggctcgtgttttgatccatcttctcagtaactcggaggatttaaaccccaaggtcagc
aagtgggcgtgtcagctcaacgatacaggtctggatgccgccagaaactttattgagcgt
tacgcagcgcagctggaagaactagacttgtctctcctcctcaactttggtcctttgcag
gacatgtttataatgaacctcaaagttaattcagacattttttcaactattggtgtaaca
gtgactgattatttacaacaagcttcactgcaccacatgaggctttttatttggactttg
gaggagcatagagacaactatgtggcctgtcatactatactggatgaatattttgatatg
gatggacattgttcagtcttaaaaaagtctgatgaaaatcaaaataattctcctttaaag
accaaaagtaaaaaccgtaaaaagaaacagaaaagttctgatacaaagggtttatatggt
tttccactggcagggacgataactccaagagaagagtgggaccaggacttttttgaagat
gaccatttatcgctccttcaccccgtcgatccattcagtgttccaagtcatcttcaagat
caagtggccgattttgagcagcagtacaacggcacctgttaccagagtttctctaaaaga
tttttggacaatcaccctgacaaaaccaaagagggtttgtatgacttttttgctcagatt
ctggaagagcacggacctctagctgctgaagaccctctcctggttggtgaactgcagtat
ttcccaactgaggctcagcagaagatcatgaaggctggtggtttggaatcctttctcctg
gaatctctgcgcttcataaagatgggcagttgtgtgggtctggctaagcaggctgtgatt
ttacagcaggctggacctggattgggtttagacgacctggacgtaattttggatcatgag
ccaatcagtcatccttcatacacacaaactgaaatccatcccattctcccaaatccttac
atcagtgaagacgcctctggatttgatttgaatttaaataaaaatgctttttactatttt
actaagtggaataatggcgacagtcaccagcagttcccctactcctcattcaaagaccaa
agtgagctgtgtgtacttggaaccgattctgctcctggagttttggaaacggattcttca
gatgaagctgccggtgaaggcatgttgaggaaacatgcagcagtacagacgtgccaggag
accatgagcagcgtggcagtgaatactgagcctcaccagagtttggaaagctgtcagggt
gacattaacaaaaagcagaagacttgccatcgtttgaagcagcagatccaggaaattacc
cggtgtcaaagcaaagccaacactaaactcaaagaagaaatcgctgctatagagggagac
atacaaaacctgaatgccactggacaggtgataaataaagaactgatggacctacagcag
aggctggaggaagatgtgaaaaaggaccagaaggagaagaaaaccaaccaggaccttcta
aaagccctgaagctggaggtagaccaggtgttggagcagcagaggagtctgacacaaggc
atcagagagaagaaaatactctacgagacaaagatgaatgattttctggagctgactaat
cagtctgcagctgagaggatgagtctagaagaggagatcaatcgctgcaaacgtcaatgt
gcttcagctgccaggagatctaacacagctcaggtgtcaacagcagagagcagcagagag
caaggtttatacagtctccacagagaactggcagatgccaaggctctgctgaccaaagtg
gatgaagcgatgcacaggcaatcaatcccaggcctgcaggtgttcagaaactcctggaat
gccaacgttcaagaagttgaaaggaaaattgccaatgcagaggtccagttcaaggctcag
attgatcaagtgaagaatgggagaaatgtcagtgagttacctctgagcaccaaccagact
gaaccttcagcacaacggtcctcaccacaggtgtccaacgtccagcagccagtggctgca
gctccaggcggaacagcagcagcagctccacctcagctgaagcagaagcatcaacacagc
actgtgtttgaaaaagccatggaacagctgtcatccattttcccagactactctaggtca
gacatgatgagatttattcaggagctgcgatcctccagtggtggaagcttcagcagcatg
gggttacaggacatggttggtggagtgtctcagttgatcctagaccatcaggagaacctc
agagctgcgagatcccaggccgttggacgtggaagtccaagagcgactcctctgctgctg
actgcggcttcagtctggccgcaagttggaacgcagagaactgtacacccgagtgccctc
aacgtggaggatccctgcatcatctgtcatgaagacatgagtccagaagacgtgtgtgtg
ctggagtgcagacacagcttccatgacaagtgcatcaggtcgtggctaaaggagcagagc
acttgtcccacctgcagagatcacactctgctgcctgatgatttccctcagctccctggc
aggagacgtccagctccataa
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integrated database retrieval system
