Cynoglossus semilaevis (tongue sole): 103395245
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Entry
103395245 CDS
T04866
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103395245 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csem03019
]
103395245 (smg6)
03032 DNA replication proteins [BR:
csem03032
]
103395245 (smg6)
Messenger RNA biogenesis [BR:
csem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103395245 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
103395245 (smg6)
DNA replication proteins [BR:
csem03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
103395245 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
TPR_17
Motif
Other DBs
NCBI-GeneID:
103395245
NCBI-ProteinID:
XP_008331125
UniProt:
A0A3P8W356
LinkDB
All DBs
Position
19:10833881..10847705
Genome browser
AA seq
1637 aa
AA seq
DB search
MADQLDRVRISAAELRAEASNTVSSGDAQKDEQHLSKQHKRREEKRPDLQRYQPVAGRGQ
THHDSEGDPGQSDAMSTYLQEQATTLQNVKKSTHKKKSDGTSDSKGVDETEDDRTGGDGS
NSQNCKKASPSQGNTGANQEKNFAENEEHAEPAGAQKPSRKARKPDREFYQPGSRRNIQG
KDCRVGKEQDKPPTRKSEQKNEHGSTVSTEESKGNKASTEKQRGNEKEVVVTQENLNSLK
LSDSKRRQENRDIRKPPLSPHAEVENISNKVENMCVKDVQVEKVVQDGEELTRRREEEKK
EKREKENRRRRAREKEKVTVWDSREDGVSCDGKSDHSKEERDRDKRAAKADKDNKPSKTI
ETHPGKRRENCRESKKGGYDNNNRSREVEKNPKMEKTEARTAGKVNKNAHNAATTASCSK
RYSKSDIRHSRNRTYSSSSASSVTSLDGRGSGKNVESRKWSRMQPKVRNKDERFRSREDE
KSHLQSWPTNGESSTESLEGSEMRDIAENRRSRRSGAEEEVRAARRVDEKNVKQGSKSGG
GGILRVSLNKQTSSSSQRLEMNTRKEGSAPCGRGGGILVLPARTDLSNSSEAGQRLFGAL
RRGGVHNSRGGRGGGVRRLWDPNNPDQKPALTNSQSSLQKSLPQSVYLQTGTGYGQLHFL
DTDDEATGSPPVPQGQHFQSQQAAAMAFYKFQNSDNPYCYPISTNNPHNSGPTPNLRFSY
PYMTPYQVVPSNGMYSSPGANQVCGTYKLGGYSQPGVGLTLEEAEQQARGELGKLLRAAD
AHEHQLSNLLSRDRVSADGLDRMAQLRADLLVLYEQIILTDIEFSDSQNVDQALWKNVFY
QVIEHFRQILKDHGHDGTTHIRNMLLTLLDEGSLFFDALLQKLQTVYQFTLEDYMDGMAI
RARPLRKTVKYALISAQRCMICQGDIARYREQATDSANYGKARSWYLKAQQIAPKNGRPY
NQLALLAVYTKRKMDAVYYYMRSLAASNPILTAKESLMSLFEEAKRKTEQLDRRRRQECE
GGSMGPTVRGRGRREAGARVEIWVRPSRPAVTQSSRRGGSESSRDSEHDGDLGSLSASDL
NKRFSLSFLHAHGKLFTKVGMESFPGVASRVLQEFRKLLQHGPSLLGSTHMLQIITINMF
TIHNAQSRGEDRESRSVLQEQSTALGLGMFALLVQHCTELLKNTPAVPVPMADGEDDNKG
MGQDGMVRVSAFPQDLTELLPTIKVWSDWMLGHPDLWNPPPCSIDGSPDVWQCLADLCNV
LAHVDHEEVPLYKVDTDEVEGDEELTVLQLKEDKLLAGFIPLLAAPQEPCYIDKHTEMSI
AADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVATSPPKHSGDTGQQESAFVKEADDV
VVEAESSLSASEEDDATELGDSENDIRELKARRHVLANKLALQQRRRDKIQAMLQTSGQL
ELEVRPLFLVPDTNGFIDHLEGLKKLLQCGIYIIVVPLIVITELDGLAKGQDNFVGGGGS
GGRSSATRGNSSDSVAHVRSLQDKARLAVDFLEKAFEAREPCLRALTSRGNQLESIAFRS
EDTSGQQGNNDDVILSCCLHYCKDKAKDFMPDQRNGTVRLHREVVLLTDDRNLRVKALTR
NVPVRDISAFLSWAKVG
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaactagaccgagtgcgaatctcagcagctgaacttcgagctgaggcgtcg
aatacagtttcttctggtgacgctcaaaaagacgagcagcatctgtctaagcaacataaa
aggcgtgaggaaaagcgtcctgatttgcagcgatatcagcctgtagctggacgtggtcag
actcaccatgatagtgaaggagatcctggtcaaagcgatgccatgtctacatatttacaa
gagcaagctacaactttgcagaatgtgaaaaagtctacccataaaaaaaaatctgatggg
acttctgatagcaaaggggttgatgaaacagaagacgacaggacaggtggtgatggcagt
aactcacagaactgtaaaaaagccagcccatcacaaggcaacactggagcaaatcaagaa
aaaaactttgctgaaaatgaagaacatgcggaacctgccggtgctcaaaaaccttcaagg
aaggcacgcaaacctgaccgtgaattttatcaacctgggagccggaggaatattcaggga
aaagactgtagagttgggaaggagcaggataaacctcccacaaggaagtctgaacagaaa
aatgagcatggctctactgtgagtacagaagaatcaaaagggaataaagcatccactgag
aagcaaagaggaaatgaaaaagaagttgtggttacacaggaaaatttgaatagtttaaaa
ttaagtgattcaaagaggaggcaagaaaacagagacattcgaaaaccaccgttatcacca
catgctgaagtggaaaacatttccaacaaagtcgaaaatatgtgtgttaaagatgttcaa
gtggagaaagtagtccaggatggtgaagaattgactagaaggagagaagaagaaaagaaa
gagaaaagagaaaaagaaaaccgcagaagaagagcaagggaaaaagaaaaagtgacagtt
tgggattcaagagaagatggggtgagttgtgatggaaaatcagatcacagtaaagaggag
agagacagggacaagcgagcagctaaagcagacaaggataacaaacctagtaagacaata
gagacacaccctggcaaaagaagagaaaactgcagagaaagtaaaaaagggggttatgac
aacaacaatcggtccagagaagttgagaaaaatcccaagatggaaaaaactgaagccaga
acagcgggaaaagttaataaaaatgctcacaacgctgctactacagcatcatgctcaaaa
cgatattcaaagtcagatatacgacattcacgaaatcgaacttacagtagcagctcagcc
agcagtgtgaccagcttagatggtcgaggatcagggaagaatgtggaaagccgtaagtgg
tcacgtatgcagcctaaagtccgtaacaaagatgaaaggtttaggagtagggaagacgaa
aaaagtcatttgcaaagttggcctactaatggggagtcctctacagaatcgcttgaagga
agtgagatgagggacattgcagaaaatagaaggagtagaagaagtggagcagaggaagag
gtcagggcagcgaggcgagtggatgaaaagaatgtcaaacagggaagcaaaagtggaggt
ggtggaatccttagggtttcccttaataaacagacaagttcctcatcacaaaggctagaa
atgaacactcgcaaggaaggctctgctccttgtggtaggggtggtggtattctggttctt
ccagcccgcacagatctctcaaattcatctgaggctggccaaagactttttggtgcactg
aggagaggaggagtgcacaatagtagaggaggtagaggaggtggggtgagaagactctgg
gatccaaataatccagaccagaaacctgcacttaccaatagccagtcttcattgcaaaag
tctctcccgcagtctgtatatcttcaaacagggactggttatggacaactacactttcta
gacacagatgatgaagcaacaggcagtcctccagtcccacagggtcaacactttcaatct
cagcaggctgccgccatggctttctataagttccagaattccgacaatccatattgctac
cctatctccaccaacaatcctcataattctggccccaccccaaacctgaggttttcatat
ccatacatgactccatatcaagtagttccgtctaatggcatgtactctagtcctggtgct
aaccaagtctgtgggacttacaaattaggagggtactctcagcctggagttggtttgaca
ttggaagaggcagagcaacaagccagaggtgaactagggaagctgctgagggctgcagat
gctcatgaacatcagctcagtaacttgctctccagagacagagtcagtgcagatggactg
gaccgcatggcccaactcagggcagatcttttggttctgtatgaacagattatcttaaca
gacattgagttctcggattcccaaaatgtggatcaggccttgtggaaaaatgtgttttac
caggtcatagagcatttccggcaaatactcaaagaccacggccacgatggcaccactcac
atcaggaacatgttgctcacattacttgatgagggatctcttttctttgatgcactgctt
cagaagctgcagactgtgtaccagtttacattagaggattatatggatggcatggcaatc
agggctcgaccattacgcaaaacggtgaagtatgctctgatcagtgcacagcgctgtatg
atttgtcaaggagatattgcacgttaccgtgagcaggccactgattcagctaactatggg
aaggctcgaagctggtacctgaaagcccagcagattgcccccaaaaatggacggccatac
aaccagttggcactgttagcagtctatacaaaaagaaagatggatgctgtgtattattat
atgcgcagtttggctgcttcaaaccccatcctgactgcaaaggagagtctgatgagtctg
tttgaagaagcaaagcgcaagacagagcagcttgacagaaggaggagacaggagtgtgaa
ggaggctctatgggtcccacagttagagggaggggaagacgggaagcaggagcacgtgta
gagatttgggttcgccccagcagacctgcagtaacccagtcctcacgtagaggaggcagc
gagtccagcagagactctgaacatgatggagacctaggaagtctcagtgcaagtgatctg
aataagaggttcagtctgagttttttgcatgcacatgggaagctcttcacaaaagttggc
atggagtcgtttcctggtgtagccagtcgtgttctgcaagagtttaggaaacttctacag
catggaccatctctgctgggcagcacacacatgctgcagatcatcaccatcaatatgttc
accatacacaatgctcaaagtagaggtgaagacagagaatcccggtctgttttacaagaa
caaagcactgccctgggtcttggcatgtttgcacttttggtgcagcactgcacggagcta
ctcaaaaacactcctgcagtgccagtcccgatggcagatggagaggatgacaataaaggg
atggggcaggatggtatggtgagggtttctgcattcccacaggaccttacagaactactc
ccaaccatcaaggtatggtctgactggatgttgggccacccagacctttggaacccacct
ccatgcagtatagatggcagccctgatgtttggcagtgcctggctgacctgtgcaatgtt
ctggcacatgtggatcacgaggaagtgcctttgtacaaagtggacactgatgaagttgag
ggagatgaggagttgactgtcttgcagctcaaggaggacaagctgcttgctggtttcata
cccctgctggctgcaccacaggaaccttgttacatagacaagcacactgaaatgtctatt
gcagcagattgtaagagggtcacggtgctgaagtactttttagaagcgttgtgtggtcag
gaagagcctctgctggcctttaagggaggaaaatatgtatctgttgcaacttctccaccc
aaacattcaggggatacgggacaacaggaatctgcatttgtgaaggaggctgatgacgtt
gtggtcgaagcagaatcatctctgtctgcgtcagaagaagatgatgcgacagagctgggc
gacagtgagaatgacatcagagagcttaaggcacgacgacacgtcctcgccaacaaactg
gcactgcaacagcggcgaagagataaaatccaggcaatgctccagacaagtggtcagttg
gagctggaagtacggcctctgttcttggtaccagataccaatggttttattgatcattta
gaaggactgaagaaactcctccaatgtggaatatacataatagtggtgccgcttattgta
attacagagttggatggtttggcaaaaggacaagacaactttgttggtggaggagggtca
ggaggtcgcagcagtgccactcgtggcaacagcagtgatagtgtggctcatgttcggtcc
ttgcaggataaggcccggctggcagtggatttcttagagaaagcttttgaagccagggag
ccatgcctcagagccttaaccagccggggcaatcagcttgagtctattgctttccgcagt
gaagatacctctgggcaacagggtaacaatgatgatgtgattttgtcctgctgtctccac
tactgcaaagacaaggcaaaagacttcatgcctgatcagagaaatggaacagtgaggctc
catagagaggtggtgctacttacagatgaccgaaacctgcgtgtcaaagctttgacccgc
aatgtccctgtgcgagacatttccgctttccttagctgggccaaagtcgggtga
DBGET
integrated database retrieval system
