Cynoglossus semilaevis (tongue sole): 103395510
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Entry
103395510 CDS
T04866
Name
(RefSeq) LOW QUALITY PROTEIN: T-lymphoma invasion and metastasis-inducing protein 1-like
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04530
Tight junction
csem04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103395510
09142 Cell motility
04810 Regulation of actin cytoskeleton
103395510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csem04990
]
103395510
Domain-containing proteins not elsewhere classified [BR:
csem04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103395510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
PH_9
RBD
PDZ
SOS1_NGEF_PH
PDZ_6
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
103395510
NCBI-ProteinID:
XP_008331463
LinkDB
All DBs
Position
19:complement(14548575..14580157)
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AA seq
1663 aa
AA seq
DB search
MGNVESQTGDGGLYGDAAGQISRKHKSRSLRLSNKQPITRRSRLSSSVKQEHRNSEASTR
SSSTPSIPQSLADNGLDPFNATDAFEEFGINPHWTQRVAMTMRPESXDAPLAPPAPETSE
ADTIAQDGGEDSMGEGEGDGNGPGEERYLQRMNEGPGEGGGFLKKRSKSADMWREDSLEF
SLSDLSQEHLTSTEEIVGGGEEVEAEKFTGPGAGSAERASSLDHLCSQRSPGLRGHRGRL
LKTRREADRDGDGQREEGLMSPAEEDVGGYGAFTLPCRRSHCLSEGLAGLGIPAAPCPAF
QGRRAQTTQDICGVLGEGSEYGDSGIDGVTAEMDGDGELVSRRCKAMSASFSVYSAAESS
VFNGSDSGSSSAGGGDGRGGEGGRGGVYENFRKELDNQAWTQGRDCTEDVGSAVSDEQSS
GTLSSAFPSDTLIGCAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKHYWVSLKGCTL
FLYDSDSRSGIDHNSVPKHALWVENSIVQAVPEHPKKDFVFCLSNSVGDAFLFQTSGQTE
LENWITAIHSACAAALARQHHREDTVKLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVTDS
KKRKTILEQIFLWEQNLEQFHMDLFRCRCYLASLQGSEPPNPKRLLGFASRPTKLAMGRL
GIFSVSSFHALVSARTESSTRRKNQAPPRTFSKRRSRFSSLWGLDTVSKRKTKGHPSINQ
VFVSSTESTKKPLERMVEVDSATEKSKEKEGCEKSLPQQNPDCSYIWVPENLTPSWVCLP
NNQPVLFIIQPGDSALEVLSSICKTHKIDRPGHYLRLKVCVENQMFFYVPKLEDDIYDVV
YKEIEIRPKVTKLIRFDQSDSCADGYGFSVAVIDEDGTQQLHITEVKAGGVASAKGLNPG
DEILLLNGKAASALQMDDLKAAFVNQALTLCVSALPQLDPQVLCSLPPRRSDGEQETATD
FYSQSHEDILDEVSGLTVESMDEGVDGQGRPNLQSPEDQEDRSLSGPGQKNSDAVPAFCR
SQHDMNPLECPISCSSSSSSSSLTPSPVSAFPPTPGAAAQRQLSHADKLRKVINELVETE
KTYVKDLSCLIECYLTPLQKESFLTQDELDVLFGNLGEMVEFQVEFLRTLEDGIRLVPDL
DRLERVEQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPDFKAFLAER
NPRQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHIN
EMQKLHEEYGAVFDQLINEQTADKKEVVDLSMGDLLLHSTVVWLNPPASLVKSKKDPHLV
AFVFKTAVVFVYKDGSKHRKKIGSSHRASVSDDRDPFRFRHMIATDSLQVHALANAEGTP
VCEIIHNKSESEGRPERTFQLCCSSPDSKKDFLKAVHSILREKQRRQLLKTESLPPNQQY
VPFGGKRLCALKGARPAMNRAASAPSRTLARRKLVRNRFTIDTNLIFHGGNNNNSHSPDD
SHQPPCPPLFQPAGLESHKPQEEDTERWVEEQFDLGSYEGQAEVIDVGQMKETDILSDDD
EYCKSVRAASAEPAELQGKMEGLVLQDGKTRSHNVNGRLEPGFGIVEDNRINHSDVSGSF
SSCGVSSALKLASLKQFAVEEAVSDDIWVRREDFTNGCKSDIF
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtggagagtcagaccggggacggtggattgtacggtgacgccgcgggacaa
atctcccgtaaacacaagtctcgctccctccgtctctccaacaagcagcccatcacccgc
aggtcaagactttcctcctcggtgaaacaggagcacaggaactccgaggcctccactcgc
tcctccagcactcccagcattccacagtcgctggcggacaacggactggaccctttcaac
gccacagatgctttcgaggagttcggcatcaaccctcattggacgcaacgggtggctatg
accatgcgtccagagtccnntgatgcccctttggcaccgcccgctcccgaaacctccgag
gcggacacgatcgcccaggatggaggagaagactctatgggggagggagagggggatgga
aacggcccaggtgaggaacggtaccttcagcgcatgaacgagggtcccggtgaaggaggc
gggtttctgaagaaacggtcaaagtccgctgacatgtggagagaggacagtctggaattc
tctctgtccgacctgagtcaggaacatctgaccagcaccgaggagattgtgggtggagga
gaggaagtggaggcggagaagttcaccggacctggtgcaggctcagctgaaagagcatcg
tctctggaccatctgtgcagccagcggagtcctggcctcaggggccacaggggccgttta
cttaaaacccgccgagaagctgatcgtgatggagacggacagcgggaggaggggttgatg
tctccagctgaggaggatgtcggtgggtacggagctttcacgcttccttgccgacgttcc
cactgtctctctgagggattggcaggacttggcattccagctgctccgtgtcctgctttc
cagggtcgacgtgcacagacaacacaggacatctgtggggttcttggtgaaggcagtgag
tacggagatagtggcatcgatggcgtcaccgccgagatggacggcgacggagagctggtg
tcccgtcgctgtaaggccatgtcggcctcgttctccgtttactcggccgccgagagcagc
gtgttcaacggcagcgacagcggcagcagcagcgcaggaggaggcgacgggagaggaggc
gaaggaggaagaggaggagtctatgagaatttcaggaaggagctggacaatcaagcctgg
actcagggtagagactgcactgaggacgtcgggtctgctgtgagcgacgagcagagcagc
gggacactcagtagtgcctttccatcggacactctgattggctgcgcacaaggtacggtc
aggaaagcgggggctctggccgtcaagaacttcctggtgcataagaagaacaagaaggtg
gaacctgccacgagacgcaagtggaaacactactgggtttccctgaaaggctgcaccctc
ttcctgtacgactccgacagccgttcgggcatcgaccacaacagcgtccccaaacacgcc
ctgtgggtggagaacagcatcgttcaggccgttcctgaacatccgaagaaggacttcgtg
ttctgtctcagcaactcagtgggggatgcattcctgttccagacgtccggacaaacggag
ctggagaactggatcaccgccatccactccgcgtgtgcggccgccctcgccaggcagcac
cacagggaggacacggtgaagctgctgagaaccgagatccgcaaactggagcagaagatc
gacatggacgagaagatgaagaagatgggggacatgcagctgtccactgtcaccgacagc
aagaagaggaagaccatactggagcagatcttcctgtgggagcagaacctggagcagttt
cacatggatctgttccgctgccgctgctacctggccagtctgcagggcagcgagccaccg
aaccctaaacgcctgctgggtttcgcctcacgacccaccaagttggccatgggacgactg
ggcatcttctccgtgtcctccttccacgcactggtgtcggcccgtacagagagctccacc
aggaggaaaaaccaagctccgccacgaaccttcagtaaacgtcgaagtcgcttctcttca
ctctggggtctggacactgtgtccaagaggaagacaaaaggacatccgtccattaaccag
gtgtttgtaagcagtaccgagtccacaaagaagcccttggagagaatggtcgaagtggac
tctgccactgagaaatctaaggagaaagaaggatgtgagaaaagtcttcctcagcagaac
ccagactgcagctacatctgggttccggaaaacctgactccctcctgggtttgtctgcca
aacaatcagcccgtgctgtttatcatccagccgggagactcagcgctggaggtcctcagc
tccatctgcaagacacacaaaatcgaccgaccgggccactacctacggctgaaggtgtgt
gttgagaaccagatgttcttctatgtccccaaactggaagacgacatctacgatgtggtc
tacaaagagatcgagatccggcccaaagtgaccaaactgatccggtttgaccagagcgac
tcctgcgccgacggatacggattttctgtggccgtaattgatgaagatggaacacagcag
ttacatattacagaagttaaagcagggggcgtggcctcagccaaaggtttgaatcccggg
gatgagatcctgttgctgaatggtaaagctgcatccgccctgcagatggatgatctgaaa
gctgcgtttgtgaaccaagcgttgaccctgtgtgtcagcgctctgccacagctggaccct
caggtgctgtgctcacttccccctcgacgctctgatggagagcaggagacagctacggac
ttctactcccagagccacgaagacattctggacgaggtgtcagggttgacggtggagagc
atggatgaaggtgtggacggtcaaggtcggccaaatctgcaaagcccggaggaccaggag
gacagatccctctccgggcctggacagaagaactcagacgcggtccctgccttttgccgc
agccagcatgacatgaaccctctggagtgtcccatatcctgctcctcgtcctcgtcttcg
tcctccctcacccccagcccagtgtcggcttttcctcccacacctggagcagcggcccag
aggcagctctcccacgccgacaagctccgcaaggtcatcaatgagctggtggagacggag
aagacctatgtcaaagacctgagctgcttaatagaatgttacctaacacctctgcagaag
gagagcttccttacacaggatgagctggacgttctgtttggaaacctcggggagatggtg
gagttccaggtggaattcctgcgaacgctcgaagatggaatccgactggtgccggacctg
gacaggctggaaagggtggagcagttcaagaaagtgctgttctccctgggcggctccttt
ctttactacgccgaccgcttcaagatctacagcgccttctgtgccagccacaccaaggtt
ccaaaggtcctggctaaagcaaaaacagacccagacttcaaggctttcctggctgagagg
aaccccagacagcagcactcgtccacgctggagtcgtatctgatcaaacccatccagagg
gtcctgaagtacccgctgctgctgagggaactctactccctgactgaccccgacagcgag
gagcactaccatctggacgttgcaatgaaggccatgaacaaggtcgccagtcacattaat
gagatgcagaagctccacgaggaatacggagctgtctttgaccaactcatcaacgaacag
actgcagacaaaaaggaggtggtggacctgtccatgggagatcttctgcttcactccacc
gtggtctggctcaaccctcctgcctctttggtcaagagcaagaaggatcctcatctggtc
gcctttgtgtttaaaacagctgttgtgttcgtttacaaggacggttccaagcacaggaag
aaaattggtagctctcaccgagcgtcagtgagtgatgaccgggaccctttccgtttcagg
cacatgatcgcaacagactccctgcaagtccatgctcttgcgaatgctgagggaacgccc
gtgtgtgagatcattcacaacaagtctgaatctgaagggcgaccggagagaacattccaa
ttgtgttgcagttcccctgacagtaagaaggacttcctgaaggcagttcactccatcctc
agagaaaaacaacgccggcagctcctgaagaccgagtctctgccgccaaaccagcagtac
gtcccatttgggggcaaacgcctgtgtgccctaaaaggagcgcgacccgccatgaacaga
gcagcctcagcgccatccagaacgctagctcgccgaaagctggtgaggaaccgcttcacc
atcgacaccaacctgattttccacggaggcaacaacaacaacagccacagtcccgacgac
tcccaccaacctccctgtccaccgctgttccaacctgccggccttgagtcgcacaaacct
caggaggaggacacagagcgctgggtggaggagcagtttgacctgggctcctacgaaggc
caggcggaggtcatcgacgtggggcagatgaaagagacggacattttaagcgacgacgac
gagtactgcaagtctgtgcgtgcggcgtcagcagaaccagcagagctgcaggggaagatg
gaaggactcgtgctgcaggacggaaagacacggagccacaacgtcaacggacgattagaa
cctggattcgggatcgtagaggataatcgaataaatcacagcgacgtttccggttccttc
tcctcctgcggcgtctcctccgctcttaaacttgcttctttgaagcagtttgcggtggag
gaggcagtgagcgacgacatctgggtgcggagggaagactttaccaacggctgcaaaagt
gacatattctga
DBGET
integrated database retrieval system