Entry |
|
Name |
|
KO |
|
Organism |
csem Cynoglossus semilaevis (tongue sole)
|
Pathway |
csem04620 | Toll-like receptor signaling pathway |
csem04621 | NOD-like receptor signaling pathway |
csem04622 | RIG-I-like receptor signaling pathway |
csem04625 | C-type lectin receptor signaling pathway |
|
Brite |
KEGG Orthology (KO) [BR:csem00001]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103396237
04217 Necroptosis
103396237
04115 p53 signaling pathway
103396237
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103396237
04621 NOD-like receptor signaling pathway
103396237
04622 RIG-I-like receptor signaling pathway
103396237
04623 Cytosolic DNA-sensing pathway
103396237
04625 C-type lectin receptor signaling pathway
103396237
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103396237
09171 Infectious disease: bacterial
05132 Salmonella infection
103396237
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:csem01002]
103396237
Enzymes [BR:csem01000]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.61 caspase-8
103396237
Peptidases and inhibitors [BR:csem01002]
Cysteine peptidases
Family C14: caspase family
103396237
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
20:5896028..5901853
|
AA seq |
488 aa
MMDFLTLCRIDDQLSSSEVEELCFLCRDFVNKKHLEKISDAKELFIRLQEVGLLENHVFL
SQLLETLRRVDLLDLLKGENWSQEETDAVPVLSPYRKMLYKIYDDMTKMNLKTYKFLLGN
RLERRQIEASKTALDLFAELEQAGFLSGTNVSELHRDLLNMDQQLAMIVQRYMEQMAHVN
DEEQPRILPRINVDYERSTISSNPQLESMSESRPSYENTIYSDAHPNQSVKPLDKTDFYS
LDHNPHGLCVVFNNEKFRGGLGDRPGTQEDSKGLRSVFTRLGFTVLIYDNLTADGIRSKL
AELSKNNFVDHDALVVCVLSHGDVGCIYGTNEQRVLLRELTQPFKSCRVPTLAGKPKLFF
IQACQGNAYQGGVLPCPPNSKEEEEVEQTIEEDAGPIQGETVPWDADFLLGMATVPECRS
FRNIYSGSIYIQELCKQLLEAAESPERDDILTVLTRVNRNVSKGLYKSRKQMPEPKYTLT
KKLVLRFV |
NT seq |
1467 nt +upstreamnt +downstreamnt
atgatggattttctgacactgtgccgcatagatgatcagctttcctcctctgaggtggaa
gaactctgcttcttgtgtcgtgatttcgtcaataagaaacatctggagaagatctctgat
gccaaagagctttttattagacttcaagaagtgggtctcctggagaaccatgttttcctc
tctcagcttcttgaaactctacgccgagtagatctccttgacctcctgaaaggggaaaac
tggtcacaggaggaaacagatgcagttcccgtcctgtcaccatacaggaaaatgttgtac
aaaatatacgatgacatgacgaaaatgaatctgaaaacatacaagtttctactgggaaac
aggctggagagaagacagattgaagccagcaagactgccctggatttatttgcagagctt
gaacaggctggttttttgtccggtacaaatgttagtgagctgcatagagatctgctgaat
atggatcaacaactggcaatgattgtgcagcgctacatggaacagatggcacatgttaat
gacgaggaacaaccgagaattcttcctcgcatcaatgtggattacgagaggtccactatc
tcttccaatccacaacttgagtccatgtctgagtcccggccaagttatgaaaacacaatt
tactcagatgcacatccaaaccagtcagtcaagcctcttgacaagacagatttctattcc
ttggatcacaatccccatggtttgtgcgtggtctttaacaacgagaaatttagagggggt
ttgggagacagacctggaactcaggaagattcaaagggtctgcgttcagtgttcacccgc
cttggctttactgtgttgatttacgataacctgactgctgatggcatacgatctaagcta
gcagagctgagcaaaaacaatttcgtcgaccacgacgccttagtggtgtgcgtactttcc
cacggagatgtgggatgcatctatgggaccaatgagcagcgggtgcttctccgagaactg
actcagccttttaagagctgtagagtccccacgcttgctgggaagcccaaactcttcttt
atccaggcctgccaaggaaatgcctaccagggaggagtccttccatgtcccccaaattcg
aaggaggaagaggaggttgaacagaccatagaagaagacgcagggcctatccagggcgag
actgtgccctgggatgccgactttctgttgggcatggcgactgtgcccgagtgccgatca
tttcgaaacatttattcgggctccatctacatccaggagctgtgcaaacagctgctcgaa
gcagcagaaagccccgagagggacgatattctaaccgttctgacacgtgtgaatagaaac
gtcagcaagggactgtacaagagtcggaaacaaatgcctgagccgaaatacactcttacc
aagaagctggttctgaggtttgtttaa |