Cynoglossus semilaevis (tongue sole): 103396406
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Entry
103396406 CDS
T04866
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103396406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csem04131
]
103396406
Membrane trafficking [BR:
csem04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103396406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
MscS_porin
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
103396406
NCBI-ProteinID:
XP_008332699
LinkDB
All DBs
Position
20:complement(9007847..9019711)
Genome browser
AA seq
1442 aa
AA seq
DB search
MTELGEPCRRISLYFPTMASCSSVGDNQLQRVIRDLQDAVLELSKEYREFGEPITDDSTN
LHKFFYKLEYLLQFDQKEKTTLLGQRKDYWDYFCDCLNKNKGANDGIRFVKSIPELKTSL
GKGRAFIRYSLIHQRLADTLQQCLMNRKTTSDWYYARSPFLKCHLTADIISHLYELNQIQ
FDVAARGYDLDAEWPAFARRTLGYAPSWKSPSRCSSINSLVGSYPHSQVQEFLPVSDLSQ
SVLNDLGEIVEPSPCGISESLRIELDQSELRQQELLVQIQDLSKEAADLKFIVKDLKEQL
AAQKSQLQDRVIAADNKNTEFFSELEKDQQMATCCDAALKIQELLDKLKTSEEKMLEARA
AAEDRTRESECLSKDLKLRDEELKNSKEKLAEVQARAHDEQEEAMGRLEELQGVVSRIQG
ALTSKEKETGNLRTQLLDLQASLDCRERRAEELKKRLQEEREEEEQRSSFSSGQDDRLES
LILDLRKKLKNREKELAVGSERINHLEEQVAKLNKENESLSSKLTNIGVDSSDQTRNDDD
LRTQCNNLMEINSKLLQTIQNREDGMSALPSSTAALLDQLASLRASENHLRSKVEAANMC
LEAREERLLDKNLHLEETVQKAFFEKEKSDVQLKKMENERKDLLEVLPLLHMELSRAQQE
LNSLSAKATVLEQDLMVSKSGRAELHQNLQETNVKLTDQTLKCELLHEKTAAEINEKLQR
LPVEQQCSSEENKENPYTLMIAEAQMEFSRGMMQQLQQEVVELRAQLLTVTEERVKLHAL
QEVTEASKEDLRLLVEQLKAQVEDLNRQHVDEILRSREREEALIRERDGEAQARAGLASE
VTASREQLDRLKLQYEALCLENSETKEALHRANTETAELGVHVCTLTAENEEANVRWEDL
STSMHELEEKASQEADRLNDCIEELKKENQDLLHQLHNEEGLLAVKQELQKLKEAQQEAE
MEQRTNQEEIQTLHLQCQSKDIAHSSQLQALNQELQEVRSQLMTEQEKVVDLENKLRELK
AEYQRYCQQIEEKNSQMAEYENLIQQKEGEMIHLKENLSRSEEALKAAQQTCREMSENVR
RVTLEKQSFDLKTAAELDDLYRTKINLEERLVELIREKDALWQKTDALEFEQKLREEETE
RDVNYCLGCRSQFSWWLRKYNCRLCGRPFCYYCCSNTVSTRQGGNRERCCRDCYGQHSAV
VERHPEEEVTHSTPGTPFSRLLQAGRAMTSVQGTDEVEKPDDGVFDIITDEEVSVVSDSL
SFVTACSAEQGQQGAAQLNSSASMGDVTSEDPEDFGAAVQDAEVCLLKSGELTLSVPFTI
SDICEFGDSSQELFIKSSCYSTLCLTMISPGPTVSWTFTSEPKSIAFSVVYRENSETPLE
QAKVLIPLTRCDSHKETIQGELKVRNAGEYTLIFDNSFSRFISKKVQYHLSLAEAVVYDG
TE
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgacagagttaggagagccgtgtcgcagaatttccttgtatttccccacaatggcctcc
tgctcatctgttggagacaatcagctgcagagggtcatcagagacctgcaggatgctgtg
ttggagctgagtaaagaatacagagagtttggagaacccatcactgatgacagcaccaac
ctgcacaaatttttttataagctggaatacctgctgcagtttgaccagaaagagaagaca
acgttgctgggccagaggaaagactactgggattatttctgtgactgcctgaacaagaac
aaaggagctaatgatggcattcgttttgttaagtctatccctgagttaaagacatcgctg
ggaaaaggacgggcctttattcgctactcactcatccaccaacgtctcgccgacacgctt
cagcagtgtctcatgaatcgcaaaaccacaagtgactggtattacgctcgcagtccattc
ctgaagtgtcatctcaccgctgacataatcagtcatctttatgagctcaaccagatccaa
tttgacgtggcagccagaggttacgaccttgatgcagaatggccagcgtttgcgaggagg
actcttggctacgccccctcgtggaagtctccgagtcgctgctccagcatcaacagtttg
gtcggcagctatccacattcacaggtgcaggagtttctgccagtttcagacttgagccag
agcgttcttaatgatctcggagaaatagtggaaccttctccttgcggcatttcagagagt
ctccgtattgagcttgaccaatcggagctaagacagcaggagctcctggtacagattcag
gatttaagtaaagaagccgctgatctaaagtttatagttaaagaccttaaggaacagcta
gcagctcagaaatcacaacttcaagacagagtaatagctgctgataacaaaaatacagag
tttttctctgagttggagaaagaccaacaaatggcaacctgctgtgacgcagctttgaag
atccaggaactgctagataaactgaagacgtcagaggagaagatgttggaagcaagggca
gcagctgaagacagaaccagagaatctgagtgtttatcaaaggatctcaaacttagggat
gaagagttgaaaaacagcaaggagaagctggcggaagtgcaagctagagcccacgatgaa
caggaagaggcgatgggacggttggaggagctccaaggggtcgtcagtcgaattcaagga
gcgttgacgtcaaaagagaaagaaacggggaacctgagaacccagcttctcgacctacaa
gcatcactggattgcagagaacgacgggcagaggagctgaagaaaaggctgcaggaggag
agagaggaggaggaacagagatccagcttcagtagcggccaggatgacagacttgagagc
cttatccttgatttgagaaaaaagttgaaaaacagagagaaagagttagctgtgggctca
gagagaataaatcacttagaggaacaggtggcaaagttaaataaagagaatgaaagtctg
agctccaaactcactaatattggtgttgattcttcagatcaaaccaggaatgatgacgac
ttacggacacaatgtaacaatcttatggaaataaactccaagctgcttcaaactatccag
aatcgtgaggatggaatgagtgcattacccagtagcacggcagctttattagatcagcta
gcttctttgagagcttcagagaatcacctcagaagtaaagtagaggctgcaaacatgtgc
ctagaagctcgagaggaaagacttctggataaaaacctccatttggaggagactgtccag
aaggctttttttgagaaggagaaatcagatgttcagttgaagaagatggagaatgagaga
aaagacctgctggaagttctgccgttgctacacatggagttatcaagagctcaacaggaa
ttaaactctctttccgccaaagctacagttttggaacaggaccttatggtctccaaaagc
ggccgagcagagttacatcagaatctccaggaaactaacgtcaaacttacagaccagact
ctgaagtgtgaactcctgcatgaaaagacagctgcagagattaatgaaaagttgcaaaga
cttcctgttgagcaacagtgttcctcagaggaaaacaaagagaacccgtacacactgatg
atagctgaagctcaaatggaattcagccgagggatgatgcagcagctccagcaggaggtg
gtggagctaagagctcagcttcttacagtaactgaagagagagtgaaacttcatgccctg
caggaggtgacagaggcctcaaaagaggacctccgtctcctagttgagcaactcaaggcc
caagttgaagatctcaaccgccagcacgtggatgagattctgcgttccagagagcgagag
gaggccctcattcgtgagcgcgatggtgaggcccaagctcgggctggtctggcctcagag
gtcacagcgtccagagagcagctggataggctgaagctgcaatatgaagctttgtgtctg
gagaacagtgaaaccaaggaggcgctgcacagagccaacacagaaacagctgaactgggt
gttcatgtttgcacgctgacggctgagaacgaggaggccaatgtgcgctgggaggatctg
tcaacaagtatgcatgagctggaggagaaggcctcccaggaagccgacaggctgaatgac
tgcattgaggagttgaagaaggagaaccaggatctcctccatcagctccacaacgaggag
gggctgttggcagtcaagcaggagctgcagaagctgaaagaagcccagcaggaggcggaa
atggagcagaggacaaaccaggaggagatccagacacttcaccttcagtgccaaagcaaa
gatattgcccacagcagccagcttcaggctctgaaccaggagttacaggaagtcagatca
cagctgatgactgagcaggagaaggtcgtcgatctggagaacaaactcagagagctgaag
gccgaataccagagatactgccaacagattgaggagaaaaacagccagatggcggagtat
gaaaatctcatccagcagaaagaaggcgagatgatccatctgaaagagaacttatcaaga
tctgaggaggctctgaaggcggcgcagcagacctgccgggagatgagtgaaaatgtacga
agagtcacgctggaaaaacagagctttgacctgaagactgcagccgaactggacgatctc
taccgcaccaaaattaatttggaggaaaggctggtggaacttatcagggagaaggacgca
ctttggcagaagacagatgccttggaatttgagcagaaactccgcgaggaggagacagag
agggacgtgaactactgtctgggctgccgcagtcagttcagctggtggctgcgcaagtac
aactgcagactgtgtgggcgtcccttctgctactactgctgcagcaacacagtgagcacc
cgacagggcggcaacagagagcgctgctgcagggactgttacggccagcacagtgcagta
gtggagcgccacccagaggaggaagtgactcacagcacaccggggacacctttcagccgc
ttgttacaggcaggaagagccatgactagtgtccaaggaacagacgaggttgagaaaccg
gatgatggcgtttttgacatcatcacagacgaggaagtcagcgtcgtcagcgactctctg
tcttttgtcaccgcctgctctgccgagcaaggacagcagggggcggcacaactaaacagc
agtgccagtatgggggacgttacctcagaggaccccgaggactttggcgcggctgtacag
gatgcggaggtttgcttactaaagtctggagaactgactctctccgtcccctttacgatc
agtgacatctgtgagtttggggacagctcccaagaacttttcataaagtccagctgttac
agcaccctctgcctcaccatgatcagccctggtcccactgtttcctggactttcacctct
gaaccaaagagcattgccttcagtgtggtctacagggaaaactcagagacaccactggaa
caggccaaggttttgatcccactgacacgctgtgattcccacaaagagacgatccaaggg
gaactgaaagtcaggaatgctggagagtacacactcatatttgacaactccttctccagg
ttcatctcaaagaaagtgcagtatcatctgagcttggctgaagctgtggtttacgatggg
actgagtga
DBGET
integrated database retrieval system
