Comamonas sediminis: ACQYWY_11890
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Entry
ACQYWY_11890 CDS
T11250
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
csen Comamonas sediminis
Pathway
csen00540
Lipopolysaccharide biosynthesis
csen01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csen00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
ACQYWY_11890 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
csen01005
]
ACQYWY_11890 (lpxC)
Enzymes [BR:
csen01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
ACQYWY_11890 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
csen01005
]
Lipid A
ACQYWY_11890 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
XTU98707
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All DBs
Position
complement(2588727..2589650)
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AA seq
307 aa
AA seq
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MLQQRTIKSLTRAVGVGLHSGQRVELTLRPAQPNTGIVFRRVDLPEPVDIPVNAEAVVDT
RMASTLGKGDVRIHTVEHVMSACAGLGIDNLYIDVTAEEIPILDGSSASFVFLLQSAGIE
LQNAPKRFLRLTKPVEIRQGEGAAEKWARLDPYHGYKLRFEIDFSHPAVDSTGQTYEFDL
GIGNYSRDIARARTFGFTKDVEMLRSNGLALGGGLDNAIVMDDYKVLNSDGLRYDDEFVK
HKILDAIGDLYIVGYPLLAAYSAFRSGHGLNNLLLRELMQRQDAWDIVTFDHVREAPQGF
AQSALAW
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctccagcaacgaaccatcaagtctttaacccgtgccgtcggcgtgggcctgcacagc
ggccagcgggtcgagctcaccctgcgccctgcccagcccaatacgggcattgtgtttcgc
cgggtcgacctgcccgagccggtggatatcccggtcaacgccgaagcggtggtggacacc
cgtatggcttcgaccctgggcaagggcgatgtgcgcatccatacggtcgagcatgtgatg
tcggcctgcgccggcctgggcatcgacaacctctatatcgacgtgacggccgaggagatc
ccgattctcgacggctcgtccgcctcctttgtgtttttgctgcagagcgccggcattgag
ctgcagaatgcgcccaagcgctttttgcggctgaccaagccggtcgagatccgccagggc
gagggcgctgccgaaaagtgggcgcgcctcgacccctaccatggctacaagctgcgcttc
gagatcgatttctcgcacccggcggtggattccaccggccagacctatgagttcgacctg
ggcatcggcaactacagccgcgatatcgcccgggcccgcacctttggttttaccaaggat
gtggagatgctgcgttccaacggtctggcgctgggcggtggcctggacaatgccatcgtg
atggacgattacaaggtgctgaacagcgacggcttgcgctatgacgacgagttcgtcaaa
cacaagatcctcgatgccattggtgacctgtacatcgtgggctatcccttgctggccgcc
tacagcgcgttccgctcgggccatggcctcaacaacctgctgctgcgcgagctgatgcag
cgccaggatgcctgggacatcgtcaccttcgaccatgtgcgtgaagccccgcagggcttc
gcgcaatctgcgctggcctggtaa
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