Cylindrospermum stagnale: Cylst_5165
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Entry
Cylst_5165 CDS
T02398
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csg
Cylindrospermum stagnale
Pathway
csg01501
beta-Lactam resistance
csg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cylst_5165
01503 Cationic antimicrobial peptide (CAMP) resistance
Cylst_5165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csg03036
]
Cylst_5165
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csg02000
]
Cylst_5165
01504 Antimicrobial resistance genes [BR:
csg01504
]
Cylst_5165
Chromosome and associated proteins [BR:
csg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cylst_5165
Transporters [BR:
csg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cylst_5165
Antimicrobial resistance genes [BR:
csg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cylst_5165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
TMF_TATA_bd
WEMBL
Motif
Other DBs
NCBI-ProteinID:
AFZ27206
UniProt:
K9X567
LinkDB
All DBs
Position
complement(5852005..5853360)
Genome browser
AA seq
451 aa
AA seq
DB search
MILDVNEPQKQLKIPIVMASNLAMHTHKLLITCSLGLALLSTSCGSLPKESAEAQSQRPG
DQKRGRSATPVDVAIARTNLLRQQPDNIGNTTPLRTVSLRSRSEGRLLALNLDVGDSVTR
GQLVGQLDDALLVTALRQAEAELAARQSEVARATTQVNNASVEVERARLEVVQARADSKR
QQELYKQGAIAEQTAEQASTKAQTATQMLRAATEQVRTEKQAVAAAQGRVYAQQAVVSQA
KERRSYARLTSPITGLVIEKVTEPGNFLQTGSEVLKIADFSRVKVVVQVSELDLAKIEVG
QSVQVRLDAFPDQTSTGRVTRISPAADATARLIPVEVVIPNSAGKIGSGLLARVNFTTQT
SQRVIVPQIAINEDKVGQTQSKDNNKIIFVLQDTSDKNKVTARAVTLGQKADGKVEILSG
LQPGEAYVVRSGKPLKDGEAVSLSILSEKAN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgattttggacgtaaatgagccgcaaaagcagttgaaaataccaattgtcatggctagc
aacctagcaatgcatacccataagttattgattacttgttcgctaggattggcactgcta
tcaaccagttgcggatcgttaccaaaggaatcagccgaggcccaatctcagcgccctggt
gatcagaaacgcggcaggagtgcaacgcctgtggatgtggcgatcgctcggactaactta
ttacgccaacaaccagacaatatcggcaacaccacgcccttgcggacggtgtcactgcga
tcgcgctcagaagggcgactattagctttgaatcttgatgtgggggacagtgtcacacgg
gggcaacttgtcggacagttagatgatgctttgttagtgacagcattaagacaagcggaa
gcagaactagcagcccggcaatcagaagtagccagggcgacaactcaggtaaacaatgcc
agtgttgaagtagaacgagcgcggttagaggtggtgcaagcccgtgcagattcaaaacgg
cagcaagaactctacaaacaaggagcgatcgccgaacaaactgccgaacaagcaagtacc
aaagcccaaactgccacccagatgctgcgggctgccaccgagcaagtccgcacagaaaaa
caagccgtcgccgccgcccaaggcagagtatatgcccaacaagcagtggtttcccaagct
aaagagcgccgatcctatgctcggctgacatcccccatcaccggactagttatagaaaaa
gttacagaaccgggcaattttctgcaaacaggcagcgaagtcttgaaaattgctgacttt
agccgtgtcaaagtcgtggtgcaagtttccgaattagatttggcaaagattgaagttggg
cagtcggtgcaagtgcgtttagatgcctttcccgatcaaacatcgactggcagagtaacg
cgcatttccccagctgccgatgccacagctcgtttaataccagtagaagtagtaattccc
aacagtgcaggaaaaattggtagtggactgctggcacgggtcaattttactacccaaact
tcccagcgagttatcgtaccgcaaatagcgattaatgaagacaaggtagggcagacacaa
tcaaaagacaacaacaaaataatttttgttttgcaggacacaagcgacaaaaataaggta
acagcgcgggccgtcaccctagggcaaaaggctgatggcaaagtggaaattttatccggc
ttgcaaccgggagaagcctatgttgttcgcagtggtaagccgttaaaagatggggaggct
gtaagtctttcgattctttcggaaaaagcaaattaa
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