Cylindrospermum stagnale: Cylst_5537
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Entry
Cylst_5537 CDS
T02398
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csg
Cylindrospermum stagnale
Pathway
csg01501
beta-Lactam resistance
csg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cylst_5537
01503 Cationic antimicrobial peptide (CAMP) resistance
Cylst_5537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csg03036
]
Cylst_5537
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csg02000
]
Cylst_5537
01504 Antimicrobial resistance genes [BR:
csg01504
]
Cylst_5537
Chromosome and associated proteins [BR:
csg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cylst_5537
Transporters [BR:
csg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cylst_5537
Antimicrobial resistance genes [BR:
csg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cylst_5537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Big_1
DUF4307
Motif
Other DBs
NCBI-ProteinID:
AFZ27546
UniProt:
K9X632
LinkDB
All DBs
Position
complement(6225624..6226934)
Genome browser
AA seq
436 aa
AA seq
DB search
MTSPEPHTDFGNDLPQPLFEPPPQSRRWLWLLLAALLLVGGGAGIAWRLLTPSNSAAVNA
QPPGVRVKLSTVETGTIEDSSEFIAKLESRRSVELKPRIEGQVSQIFVRSGDTVGLGSAI
IQIDSRQQQAAVSGINAAGQAAVAQLENARATLKSLQADRLSNVADVQLNQQDYKRYSDL
ADQGAVSRQTKDQYANRLATARANLGAIDAKIQAQKATISQVERSLQQADANSREQQVQL
QYYKITAPFSGTVADIPVKVGDFVNNATKLATVTQNRPLEVNISVPLERGPQLRKGLPVE
VINAQGKRLGTSEVSFISPNVADGTQSILLKALYNNSQGELRADQLVKARVIWSQRSGAL
IPTTAVSRIAGETFAYVTQTEKSPQGVSQLVARQKRVKLGGITGNNYQVIEGLQPDEKII
VSGLLNLRDGVPIVPE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccctgaaccgcacacggattttggcaacgatcttccacagcccttatttgag
ccacctccccaatcacggcggtggctttggttattgttagcagcactactattagtcggg
gggggagcaggtatagcttggcgtttgctcactcctagtaattcagccgctgtaaatgct
caaccgccaggagtcagagtaaaactatcgacagtggaaacaggcacaattgaggatagt
tcagagttcattgccaagctagagtcccggcgttcggtcgaactcaagccaagaattgag
ggtcaagtcagccaaatatttgttaggtcaggagatacagtcggattaggatcagcaatt
atccaaatcgactctagacagcaacaagcagcggtcagtgggatcaatgctgctggtcag
gcggctgtagcgcaactagagaatgcccgcgctacattaaaatctctgcaagctgatcgg
ctatctaacgttgctgatgtccaattgaaccagcaggactacaaaaggtattctgacctg
gctgaccaaggagctgtatctcgacaaactaaggatcagtatgctaacaggctggctaca
gctagggctaatctcggtgcaattgatgccaagattcaagcacagaaagctactatatcc
caggtagaaagatccttgcagcaagcggatgccaatagtagggaacaacaagtccagctc
cagtactacaaaattacggctccctttagtggcacagtcgccgatatcccggtcaaagta
ggtgatttcgtgaataatgccacaaaattagctactgttactcaaaatagacctttagaa
gtcaatatctctgtaccgctggagcggggcccccaattgcgtaagggattaccggttgaa
gtgatcaacgctcaaggtaagaggctgggtacgagtgaagtatctttcatttctcctaac
gttgccgatggtacacaatcaatattgctcaaagcactctataacaattctcaaggtgag
ttgcgggctgatcaattggtgaaggctagagtgatttggagtcagcgttctggagcttta
attcccacaacagcagtgtctcgcatagctggggaaacttttgcctatgtaacgcaaaca
gaaaaatctcctcaaggtgtttctcaacttgtggcgcggcaaaagcgggtgaaattaggt
gggatcacaggtaataattaccaagttatcgaaggattacagccagacgagaaaattatt
gtctcagggctgctgaatctcagagatggcgtgccgatagttcctgagtaa
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