Clostridium saccharolyticum WM1: Closa_0453
Help
Entry
Closa_0453 CDS
T01288
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh01502
Vancomycin resistance
csh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Closa_0453
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Closa_0453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csh02022
]
Closa_0453
01504 Antimicrobial resistance genes [BR:
csh01504
]
Closa_0453
Two-component system [BR:
csh02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
Closa_0453
Antimicrobial resistance genes [BR:
csh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Closa_0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ADL03090
UniProt:
D9R3X7
LinkDB
All DBs
Position
514931..515638
Genome browser
AA seq
235 aa
AA seq
DB search
MSETISILVVDDEKEIADLVEIYLVSDGYKVYKANNAEEGLGVLEKNQIHLVLLDIMMPG
MDGLQMCKKIRETNNIPIIMLSAKSTDLDKILGLGTGADDYVTKPFNPLELTARVKSQLR
RYTQLNPNSAVNEAVKNEIAIRGLTINKDNHKVTVYGEEIKLTPIEFDILYLLASNPGRV
FSTDEIFEKVWNEKVYEANNTVMVHIRRLRGKMKEDTRQNKIITTVWGVGYKIEK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacaataagcattctggttgtggatgatgagaaagagattgcagacctggtg
gaaatctatttggtcagtgatggatataaagtatataaagcaaataatgcggaagaagga
ctgggagttctggaaaagaaccagatccatctggtgcttttagacatcatgatgcctgga
atggacggcctgcaaatgtgcaagaaaatacgggagacaaataacatcccaatcatcatg
ctaagcgccaagtccacggatctggacaaaatactgggacttggaaccggggcggatgat
tacgtgacaaagccttttaacccactggagctgacggcccgggtaaaatcccagctacgc
cgttatacccagttaaatcccaacagtgcggtgaacgaggcagttaagaatgaaatcgca
atcagagggctgaccattaacaaggataaccataaggtgactgtttatggagaagagatc
aagctcactcccattgagtttgatatcctttatttactggcctccaatcctggaagagtg
ttcagtacggatgagatttttgaaaaggtttggaatgaaaaggtctatgaggccaataac
acggtaatggtacatatcagacgcctgcggggcaagatgaaggaagataccagacagaac
aagatcatcaccacggtgtggggggtaggatacaaaattgaaaaatga
DBGET
integrated database retrieval system
