Clostridium saccharolyticum WM1: Closa_3166
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Entry
Closa_3166 CDS
T01288
Name
(GenBank) integral membrane sensor signal transduction histidine kinase
KO
K18350
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh01502
Vancomycin resistance
csh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Closa_3166
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Closa_3166
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csh01001
]
Closa_3166
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csh02022
]
Closa_3166
01504 Antimicrobial resistance genes [BR:
csh01504
]
Closa_3166
Enzymes [BR:
csh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Closa_3166
Protein kinases [BR:
csh01001
]
Histidine kinases
OmpR family
Closa_3166
Two-component system [BR:
csh02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
Closa_3166
Antimicrobial resistance genes [BR:
csh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Closa_3166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HATPase_c_5
HATPase_c_2
SesA
Ferredoxin_N
Motif
Other DBs
NCBI-ProteinID:
ADL05697
UniProt:
D9R8G8
LinkDB
All DBs
Position
complement(3409383..3410489)
Genome browser
AA seq
368 aa
AA seq
DB search
MNKKFSGKYKKTILLRHLVWAIAILVIFAICYFMIMVAYPDNFYIILERMIGYDLAYLIH
SYEPAVILFIIVTSQFLVWIGVEWNSSRKIMKIMDSLDSVLDNSADDIGLPTEFSDLQNW
LNLLKTQNREQQHLKEIEVQKKSDTLTYLAHDIRTPLASVVGYLSLLCEAPDMPEEQRNK
FIRTAFEKALKFENLIDEFFDITRYSLSDKALVKKETDLCFLIEQIADEFYPFLQQKGLC
LNLDLADDLFIFVDAEKIARVFNNVIKNAITYSYPQSVIEVSAKKSSEYIIAKIKNHGET
IPNDKLERIFDKFYRTDEFGDSDIGGTGLGLAIAKEIMRMHNGTITAESFEENTVFTITL
PIDNNIQQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagaaattttcaggaaaatataaaaaaacaattttacttcggcatttagtatgg
gcaattgctatattagttatttttgctatttgctattttatgataatggtagcatatccg
gataatttttatataatacttgaaagaatgattggctatgatttagcttatttaattcat
agctatgaaccggcagttattctctttattattgtaacatcacaatttctggtatggatt
ggagttgaatggaattcctcacgaaagattatgaaaatcatggacagtctggactctgtt
ttagataattccgcagacgatatcggattgcccacagaattttctgatttgcaaaattgg
ctcaatcttttaaaaactcaaaatagagaacaacagcatttaaaggaaatagaagttcag
aaaaaatctgatactcttacctacctcgcacatgatataagaacccctcttgcttccgtt
gtcggatatttaagccttttatgtgaagcgccggatatgccggaagaacaaagaaataaa
tttataagaacagcttttgaaaaagcattgaagtttgaaaatttaatagacgaatttttt
gatattacacgttacagcctatcagacaaagcattagtaaaaaaagaaactgatttgtgc
tttttaattgaacaaatagctgatgaattttatccgtttctacagcaaaaagggctatgc
ttaaatttagaccttgctgacgatttatttatttttgttgatgcagaaaaaattgcgagg
gtttttaataatgtcataaaaaatgcaatcacatatagttacccacaaagtgttattgaa
gtctcggcaaagaaatcaagcgaatatataattgcgaaaattaaaaatcatggtgaaaca
ataccaaatgataaattagaacgtatatttgataaattttatcgtacagatgaattcgga
gattctgatataggcggtacaggacttgggttagcaatcgcaaaggagattatgagaatg
cacaatggaacaatcaccgcagaaagttttgaagaaaataccgtttttactattaccttg
cctattgataataatatacagcaataa
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