Clostridium saccharolyticum WM1: Closa_3167
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Entry
Closa_3167 CDS
T01288
Name
(GenBank) two component transcriptional regulator, winged helix family
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh01502
Vancomycin resistance
csh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Closa_3167
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Closa_3167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csh02022
]
Closa_3167
01504 Antimicrobial resistance genes [BR:
csh01504
]
Closa_3167
Two-component system [BR:
csh02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
Closa_3167
Antimicrobial resistance genes [BR:
csh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
Closa_3167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
ADL05698
UniProt:
D9R8G9
LinkDB
All DBs
Position
complement(3410482..3411174)
Genome browser
AA seq
230 aa
AA seq
DB search
MNEKILIIDDEKEITDLIEVFLQNENFQVFKCYSSQDALMLIKNESFDLAIIDVMLPDGN
GFELCKLIREKYTYPIIMLTSKTEGIDRVTGLSLGADDYVTKPFLPLELVARVKAQLRRV
QHYDGKENNTSETLMVMGLFLNKTSHECNLNGKTIKLTPTEFSILWLLCKNRGKVFSADE
LFQQIWGEKYFKNSRNTVMVQIRHIREKLYDTGNKPKFVKTVWGVGYIIE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaaatactaattattgatgatgaaaaagaaattactgatttaatagaagtg
ttcttacaaaatgaaaatttccaagtgttcaagtgctattcttcacaggacgcacttatg
cttatcaaaaacgaaagttttgatctggcaattatagatgtgatgttaccagatggaaat
ggatttgaattgtgcaaattaatccgagaaaagtatacttatcctatcattatgctcact
tccaaaacagagggtatagatcgtgttacgggactatctttgggagcagatgattacgtt
acaaaacctttcttgccacttgaattagtagcacgggtaaaggctcaattaagacgagtg
cagcattatgacggaaaagaaaacaatacatcggaaacacttatggtaatgggacttttt
cttaataaaacttctcatgaatgtaatttaaacggtaaaacaattaagttgacacctaca
gaattttctatattatggcttttgtgcaaaaacagaggaaaagtttttagcgcagacgaa
ctctttcaacagatatggggtgagaaatattttaaaaacagtaggaatacagtaatggtt
caaattaggcatataagagagaaactatatgataccggaaataaaccaaaatttgtaaaa
actgtatggggagtgggatatatcattgaataa
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