Chryseobacterium shandongense: EG350_03890
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Entry
EG350_03890 CDS
T05920
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csha
Chryseobacterium shandongense
Pathway
csha01501
beta-Lactam resistance
csha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG350_03890
01503 Cationic antimicrobial peptide (CAMP) resistance
EG350_03890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_03890
01504 Antimicrobial resistance genes [BR:
csha01504
]
EG350_03890
Transporters [BR:
csha02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EG350_03890
Antimicrobial resistance genes [BR:
csha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG350_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AZA56382
UniProt:
A0A3G6QEV5
LinkDB
All DBs
Position
complement(844932..848114)
Genome browser
AA seq
1060 aa
AA seq
DB search
MLKQFIERPVLSTVISIILLLLGALSLFNLPIALFPDIAPPSVQVTAFYPGANAEVVARS
VATPIEEAVNGVENMTYMTSNSSNDGTMTLSVFFKQGSDPDNAAVNVQNRVSKAMSQLPQ
EVVQAGISTQKVQNSMIMFMGLTSNDPKQYDELFLQNYLKINIIPQIQRIPGVAQAQVFG
TRDYSMRLWLKPDRLAANNLSPQEVLNAVKDHNLEAAPGRLGQGSKETYEYILKYKGKLN
KNEDYENIAIKANSDGSFLRLKDVARVEFGSYTYTAANRVDGKPVSGFAIMQTAGSNANE
ILTEIEKQVDQFKTTLPKGVEPIIMYNSKDFLDASIHQVVETLVIAFILVFIVVYIFLQD
FRSTLIPAIAVPVAIIGTFFFLQLFGFSINMLTLFALVLAIGIVVDDAIVVVEAVHSKME
HTGMPVEQATMSSMNEISGAIISITLVMCAVFIPVGFMQGPAGVFYRQFAFTLAIAIMIS
AVNALTLSPALCAMFLNDPQGEHGEHGKKSGFGARFFNAFNVSFNNLTKKYIYSLKFLIK
NKWVAVGGLVLITAASIFLIKKAPSGFIPTEDQGFILYAVNTPPGSSLDRTHRATEQIDQ
IINGEKAKNHLWVADGLNFISNANASPYSAGFIKLKDHDQRGEITDPDQIAAGLTGKVSQ
VKDASAFFFNFPTVQGFGNVSGFEFMLQDKTNGSLENLGTTTQAFIGELMKRPEIAFAFT
TYAAGNPQFTIEVDNDKANQLGVSITELMQTMQIYYGSSFVSDFNRFGKYYRVMAQADIP
YRTDANSLEGIYVKNKSGEMVPVKTLVTLKRAFGPETVTRNNLFNAVTINGTPKPGYSTG
DAIKAVEEVAEKSLPRGFGYEWTGITREEIKTSGQTAFIFMLSILFVYFLLAAQYESYIL
PFAVILTIPTGIFGVFAFTGLAGIDNNIYVQVGLIMLVGLLAKNAILIVEFAVQRRNAGR
SLLEAALQASRLRLRPILMTSFAFIVGMLPLVFTQGASAKGNHSIGFSTVGGMLTGVVFG
IFIIPVMFVIFQYLHEKMPSRKKKRLQRQKLEAELLATTH
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacaatttatagaaagaccggtactttcaacggtcatctccatcatactttta
ttattgggtgccctgtcactctttaatttgcccattgccctctttccggatattgcgcca
ccaagtgttcaggtgaccgcgttttatccgggtgcgaatgcggaagtggttgcccgttct
gtagcaactcctatcgaagaagcggtaaacggagtggaaaacatgacctacatgacttcc
aactccagtaacgacggtaccatgactttgagcgtatttttcaagcagggttccgatccg
gataatgctgctgtaaatgttcagaaccgtgtatcgaaagccatgagccagcttccgcag
gaagtggtacaggcgggaatttccacgcagaaagttcagaacagcatgattatgttcatg
ggattaaccagtaacgaccctaaacaatatgatgaacttttcttacagaattatttgaaa
atcaatatcattccacagatccagcgtattcccggggttgcccaggcgcaggttttcgga
acaagagattattccatgagactttggctgaaaccggatcgattggcagcgaataatctt
tctccacaggaagtactgaatgccgttaaagatcataacttagaggccgctccgggacgt
ttaggacaaggaagtaaagaaacgtacgaatatattttaaagtataagggtaaattaaac
aaaaacgaagactacgaaaatattgccatcaaagccaacagcgacggatctttcctgaga
ctgaaagacgtggcaagagtagaatttggttcctatacttataccgcagccaacagagtg
gatggcaaaccggtttcaggttttgcgattatgcagaccgcaggatctaatgccaatgaa
atcttaaccgaaattgaaaagcaggttgaccagttcaaaacaacccttccaaagggtgtc
gagccgatcatcatgtacaactccaaagactttttggatgcttccattcatcaggtggtt
gagacattagtaatcgcatttatcctggtatttattgtcgtatatattttccttcaggat
ttcagatcgactttaattccggcgattgcagttccggtggcaattatcggtacgttcttc
ttcctgcagctgtttggattcagtatcaacatgttgaccttattcgctttggtacttgct
attggtattgtagtggatgatgcaatcgtggtggtggaagctgtccattccaaaatggaa
catacaggaatgccagtagaacaagccacgatgagctcaatgaatgagatctccggtgca
attatttcaattacactggtaatgtgtgccgtatttatcccggttggtttcatgcagggt
cccgcgggagttttctacagacaatttgcctttacattggctattgcgatcatgatttct
gcggtgaacgcattaacattaagtccggctttatgtgccatgttcttaaatgatcctcag
ggtgagcacggagagcacggtaaaaaatcgggatttggcgcaagattcttcaacgcattt
aatgtaagctttaataatttaaccaaaaaatacatttacagccttaaatttttaattaaa
aataaatgggttgccgtaggaggattagtattaattaccgcagcaagtattttcttgatt
aaaaaagcgccatccggatttattcctaccgaagatcagggattcattctgtatgcggta
aatacgcctccgggaagttcattagacagaacccacagagcgactgagcagattgaccag
atcatcaacggggaaaaagcgaaaaaccacctttgggtagcagacggtctgaacttcatc
agcaatgccaacgcctcaccctattctgctggtttcattaaattaaaagatcacgaccag
cgtggtgaaatcaccgatcccgaccagattgcagctggattaacaggtaaagtttcacag
gtaaaagatgcgagtgcatttttcttcaacttccctacagtacagggatttggtaacgtt
tccggttttgaattcatgcttcaggataaaaccaacggatcattggaaaatttaggaaca
accactcaggcattcattggcgaattgatgaaacgcccggagattgcatttgctttcaca
acctatgcagccggaaatccacaattcacaatcgaggttgataatgataaagcgaaccaa
ttaggagtttctatcacagaattgatgcagacgatgcagatttattacggaagtagcttc
gtttcagatttcaacagattcggaaaatattacagggtaatggctcaggcggatatccca
tacagaacggatgcgaattctctggaagggatttatgttaaaaataaatcgggtgaaatg
gttcctgtaaaaacattggtgactttaaaaagagctttcggacctgaaacggtaaccaga
aataatcttttcaacgcagtgactattaacggaacgccaaaaccgggatacagtaccgga
gatgcgattaaagcagtagaagaagtggcagaaaaatcacttccgagaggatttggatat
gaatggaccgggattacccgcgaagagatcaaaaccagcggacagacagcgtttatcttt
atgttaagtattttgtttgtgtatttccttttagcagctcaatatgaaagctatatcctt
ccgtttgcggtaatcttaacgattccgacaggtatttttggggtgtttgctttcacagga
ttagctggaattgataataatatttatgttcaggttggtttgattatgcttgtcggatta
ctagcgaaaaacgcgatcctgattgtagagtttgccgtacagagaagaaatgcaggaaga
tcgttactggaagcagcgcttcaagcttcaagattgcgtttaagaccaatcttaatgacc
tcatttgcattcattgtcggaatgttacctcttgttttcactcagggagcttccgcaaaa
gggaatcattcaatcggcttcagtaccgttggcggaatgttgacaggtgtagtattcggg
atttttattattccggtaatgtttgtaatcttccagtatttgcatgaaaaaatgccgagc
agaaaaaagaaaagacttcaaagacaaaaactggaagctgaacttttagctacaactcat
taa
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