Chryseobacterium shandongense: EG350_04945
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Entry
EG350_04945 CDS
T05920
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
csha
Chryseobacterium shandongense
Pathway
csha01501
beta-Lactam resistance
csha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG350_04945
01503 Cationic antimicrobial peptide (CAMP) resistance
EG350_04945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csha03036
]
EG350_04945
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_04945
01504 Antimicrobial resistance genes [BR:
csha01504
]
EG350_04945
Chromosome and associated proteins [BR:
csha03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EG350_04945
Transporters [BR:
csha02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EG350_04945
Antimicrobial resistance genes [BR:
csha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG350_04945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
AZA59370
LinkDB
All DBs
Position
1076569..1077648
Genome browser
AA seq
359 aa
AA seq
DB search
MKRVVASIALSSLLLLSCNKKKEEKEEAAVYPVTSPVVMDTVIDKEYVAQIRSVKNIEVR
AQEKGFLEKIFVDEGQFVHQGQTLFRIMPKLYQAELLKAQAEVAQATIELKNASTLANNN
IVSKNERAMAKAKLDAANAEAKLAQIHLSFTDIKAPFSGIIDRIPLKLGSLVDEGDLLTS
LSDNNDIYAYFNVSEPEYLNYQRNVASRGSDMVDLVMANGDIFPQKGQVQTIEGEFDSET
GNIAFRAKFPNPDKLLRNGETGKVRMTLPVRNALIIPQKATYEIQDQKYVFVVDKNGVAR
SKNIKVAYELPDVYVVASGLSIGDRILLEGVQKVKDDQKVQVKQQDPKKVLQSLKLKAE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atcaaaagagttgtcgcaagcatcgcgctaagtagtcttttgctgttaagctgtaacaag
aaaaaagaagaaaaagaagaagctgctgtttatcctgtaacctcacctgtagtaatggat
acggtgatagacaaggaatatgtagctcagatccgatctgtaaagaacattgaagttcgt
gcacaggaaaaaggtttccttgaaaagatctttgtagacgaaggacaatttgttcaccaa
gggcagaccttatttagaattatgccgaaattgtatcaggcagaattgctgaaagctcag
gcagaagttgctcaggctacaattgaactaaaaaatgcaagtacattggccaataataac
attgtttccaaaaatgagcgagcgatggcaaaagcaaagcttgatgcagccaatgcagaa
gcaaaactggcccagattcatctgtcttttacagatattaaagctccgttctcaggaatt
atcgacagaattcctttgaaattgggaagtcttgtagatgaaggcgatttattaacttcc
ctttccgataacaacgatatttacgcgtacttcaacgtttcggagccggaatatctgaac
tatcagagaaatgtagcttcaagaggaagcgatatggtggatctggtgatggcaaatgga
gatatttttccgcaaaaaggacaggttcagactattgaaggagagttcgacagtgagaca
ggaaatattgctttcagggcaaaattcccgaatccggataaacttctgagaaacggagaa
accggaaaagtacgaatgacgttaccagtgagaaacgcattgatcatcccgcaaaaagct
acttatgaaatccaggatcagaaatatgtttttgtggtggataaaaatggagtggcaaga
tctaaaaatataaaagttgcttacgaacttcctgatgtatacgttgtggcttcaggactt
tcaataggagacagaatcttactggaaggcgttcagaaagtaaaggatgatcagaaagtt
caggttaaacaacaggatccgaaaaaagttcttcagtcattaaaattaaaagcagagtag
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