Chryseobacterium shandongense: EG350_05980
Help
Entry
EG350_05980 CDS
T05920
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csha
Chryseobacterium shandongense
Pathway
csha01501
beta-Lactam resistance
csha01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csha00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EG350_05980
01503 Cationic antimicrobial peptide (CAMP) resistance
EG350_05980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csha02000
]
EG350_05980
01504 Antimicrobial resistance genes [BR:
csha01504
]
EG350_05980
Transporters [BR:
csha02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EG350_05980
Antimicrobial resistance genes [BR:
csha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EG350_05980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
AZA56747
UniProt:
A0A3G6MNV0
LinkDB
All DBs
Position
1296363..1299521
Genome browser
AA seq
1052 aa
AA seq
DB search
MNLIRFALRKPIAVMVVFLSVIVLSLTAIKKIKVDIFPEVELPSMYIAMPYGGLSPQYMD
GFMSNEFQKVLLFVNGVKNIDFKSVQGLTLMKLTFYPGTDMAQAAGEVSTQVSRAMGFLP
PGAVPPMVVRFDGNSLPVGQLVFESDNHSVTELQTMVLTKIRPMFVEIPGITAPAPFGGN
IRSIVVNIDPAAMQSNGLSPEEITLAITKSSHPSPAGNIRMGETNYMAPINSIAKDPAEF
LKIPIKTQDGRTLYVGDVANVQDGADQTSGYALVNGKRSVYLPVIKKSDASTLTAVENLK
KAMPKLRDQLPDDVKVSYEFDQSKYIERSLSNLIHEGLLGALFTGLVIILFLGDLRGALI
VVFTIPIAILTAVCVLYFAGYTINIMTLSGLALSIGILVDEATVTIENIHQHMEMRKTKP
KAILDAVLEISIPKVLILLCILAVLTPAFIMTGIPKDMFLPLSFAVAFAMIASFLASQTF
VPILANWMMKNKHIEKHYVKNRSFFYRFRTGYSHKMRKWSGRTLVLFSAYIIFSGLLIFL
MMRSLGTDIMPLSNSGDFQMRIDAPQGSRLEKTEKLVKDILKDIEGILPENAVSISSAYV
GLHPAATPINPIFLFTNGTHQSVLQVSVNKEIFSGSMEDLKEKIRKKIAEKHPEAQINFE
PMELTEKIIGQGSMTPIEIKVGSPNLKLAASHAKKIEEKLKSNDFLRDVRIAEPLQYPTL
QTNVDRNLAAQFGLTMQDVTRSLVTATSSTRYTDKNLWVDPKSGLVFQTQVQIPESIMNS
EEILKSLPLKKDSPRPVLEDIATVKKTTAPAQVNRKGPMRYVTIIGNVYGKDLGSASKAV
KNAISETGKPPKSVSVWTEGTLQLLDDTLDSLAMGLLAAVLAIFLMLSAYYQSFKVPFVV
LSVIPSVIVGSLVLIFITGSTLNLQSYMGMIMSIGVSVSNAVLLINQAEYYRKHYHISAL
HSARMAAASRLRPVLMTALAMLAGMIPMAIGIGEGSEQVAPLGRAVIGGIIASTLTILLL
VPHFFAAVMSNAGHSNPSLDPEDEESKFFVQS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatacgttttgcgctcagaaagcccattgccgtcatggtcgttttcctgtcg
gtcattgtgctttcgcttacagctataaaaaaaataaaagtagatattttcccggaggta
gagttgccgtcaatgtatattgcgatgccttacggagggctttcacctcaatatatggat
ggttttatgtccaatgaatttcaaaaagttttactctttgtgaatggtgtcaagaatatt
gatttcaaaagtgttcagggactgaccttaatgaaactgaccttttatccaggcaccgat
atggcgcaggctgcaggtgaggtttccacgcaggtttcacgggcaatgggatttttacca
cccggtgcagtaccgcctatggttgtgcggtttgacggtaattcactcccggtcggtcaa
cttgtctttgaaagtgacaatcactctgtaacagagcttcagacaatggtcctaaccaaa
atccggccgatgtttgttgagattcccggtattacggctccggcaccttttgggggtaac
atccgttcgatcgttgtaaatattgacccggctgcaatgcagagtaacggactaagtccg
gaagaaattactttggcgatcacaaaaagcagccatccttcgccagcaggaaatatcaga
atgggcgaaacgaattatatggcaccgatcaattccatagccaaagatcctgcggagttt
cttaaaatcccgataaagacccaagacggtagaactctttacgtgggtgatgtagccaat
gttcaggatggagctgaccagacatctggatatgcattggtcaatgggaaacgctctgtg
tatctcccggtgatcaaaaaatcagatgcttcaacactgacagcagttgaaaatctaaaa
aaagcaatgccaaaactgagagatcagcttccggatgatgtgaaggtgagttatgaattt
gaccagtcaaaatatattgaacgttccctttcaaatctaattcatgaaggacttttgggt
gcactttttacaggactggtcattattcttttccttggtgaccttcgaggtgcactgatc
gtggtctttacaattcccatagcaatattaacagccgtctgtgtgctctattttgcagga
tatactattaatataatgaccttgagtgggttagccctatccatcggaattttggtagat
gaagctacggtcacgatcgagaatatccaccagcatatggaaatgaggaaaaccaaaccc
aaagccattcttgatgcagtacttgaaatttccattccgaaggtgctgatattattatgt
attctggccgttcttacgcctgccttcattatgacgggcattccaaaagatatgtttctt
ccgctttcttttgcagttgcattcgcaatgatagcttcctttctggcatcccagaccttc
gttccgatcctggctaactggatgatgaagaataagcatattgagaagcattatgttaaa
aacaggagttttttctatcgattcagaacgggctacagtcacaaaatgagaaaatggtcg
ggaaggactttggtattgttttcggcctatatcattttctcgggccttttaatattttta
atgatgcgctcattgggaaccgatattatgcctctttccaacagcggtgattttcagatg
agaattgatgcgccacagggaagccgtctggagaaaactgaaaagctggtgaaggatatt
ctcaaagatattgaaggtattttgccggaaaatgcggtcagcatcagttcggcctatgtc
ggtttacatccggcagcaacgccgatcaatcccatatttcttttcaccaacggaacacac
cagtctgttttgcaggtttctgtaaataaggagatcttttcagggtctatggaagatctg
aaagaaaagatccgcaagaagattgctgaaaagcatcctgaagcacaaatcaattttgaa
ccgatggaacttaccgaaaaaattattggacagggatcgatgaccccgatagaaatcaag
gtaggatctccgaatctgaaactggcggcatctcacgcaaaaaaaatagaggaaaagctg
aaaagcaacgatttcctgcgagacgtccgcattgcagagccacttcaatatccgacgtta
cagaccaacgtagaccgaaatctcgctgcgcagttcggactgacgatgcaggatgtgaca
cgcagtcttgtgaccgctacctcttcaacccgctacaccgacaagaacctctgggtcgac
ccaaaatcaggacttgtctttcagacacaggtccagattccagaaagtataatgaactct
gaagagatcctgaaatcacttccactgaaaaaagacagcccgagacccgttcttgaagat
atcgctacagttaaaaaaacgaccgcacctgcacaggtcaaccgaaagggacctatgaga
tatgtaacaattatcggaaatgtgtacggaaaagacctgggctctgcttccaaagcggta
aaaaatgccatcagtgagaccggaaaacctccaaaaagtgtttctgtctggacagaaggc
acactgcagctactggatgatacactcgacagtcttgcaatgggacttttggcggcagta
ctagcgatattcctaatgctttctgcttattatcagtcatttaaagtaccttttgttgtt
ctttccgtgattccttccgtgatcgtgggaagtcttgttttgattttcattaccggcagt
acgctcaacctccagtcatatatggggatgattatgtccatcggtgtttcggtttcaaat
gccgtattacttatcaatcaggcagagtactaccgtaaacattaccatatcagtgcgctt
cattctgcgagaatggcagcggcgtccagactccgccctgtactgatgaccgctttggcg
atgcttgccgggatgattcctatggcaatcggtatcggggaaggttctgagcaggttgct
ccacttggtagagctgttatcggtggtatcatcgcatccactcttaccattctgcttttg
gttccgcatttttttgcagcagtaatgtccaatgcaggacattcaaatccttccttggat
ccggaagatgaggaaagtaaatttttcgtacaatcttaa
DBGET
integrated database retrieval system
