Camellia sinensis (tea plant): 114287114
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Entry
114287114 CDS
T07364
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114287114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114287114
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114287114
Complex C
U5 SnRNP specific factors
114287114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
EF-G_D2
Septin
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
114287114
NCBI-ProteinID:
XP_028086196
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MDESLYDEFGNYIGPDIESDQESDREEDDEDLPDKLGDEEDASDGEDAGGASNGWMTTTD
DIDMDNQIVLAEDKKYYPTAEEVYGEEVETLVMDEDEQPLEQPIIKPVRNIKFELGVKDS
STYVSTQFLLGLMSNPSLVRNVALVGHIHHGKTLFMDMLVEQTHHISTFDQNSEKHMRYT
DTRIDEQERRISIKAVPMSLVLEDSNSKSYLCNIMDTPGHANFSDEMTAALRLADGAVLI
VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTIEVINNH
ISAASSTAGNVQIIDPAVGNVCFASASAGWSFTLQSFAKLYVKLHGIPFDANKFASRLWG
DFYFDSDTRVFKKKQPASGVERSFVQFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLSN
AAYKLNVRPLLRLACSSAFGSATGFTDMLVHHIPSAQDAASRKVEHIYTGPRDSAICRAM
DECDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGEIQTGQTVRVLGEGYSPDDEEDMTIK
EVTKLWVYQARYRIPISKAPPGSWVLIEGVDASIMKTATLCNLDYDEDVYIFRPLQFNTL
PVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMKDLR
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKRNKITMIAEPLERGLAEDIENSVV
SLDWPRKKIGDFFQTKYDWDLLAARGIWAFGPDKQGPNILLDDTLSSEVDKTLLNAVKDS
IVQGFQWGAREGPLCDEPIRNAKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATP
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFET
DLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
DVSINKFFDEAMVVELAQQAADLHQQMI
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagcttatacgatgaatttgggaactatattgggccggatattgagtcagat
caggagagtgatagggaggaagatgacgaagacctccctgacaaacttggtgatgaggaa
gatgcatcagatggtgaggatgctggcggtgcatccaatgggtggatgactaccactgat
gacattgatatggataatcaaattgttcttgctgaggacaagaagtattatccgactgca
gaagaggtttacggggaagaagttgaaacattagtcatggatgaagatgagcagcccctt
gaacaaccaataattaaaccagtcaggaatattaagtttgagttgggcgttaaggattca
tctacgtatgtctcaacccaatttcttttggggcttatgtcaaacccttctttggttcgg
aatgttgccttagtaggacacatacaccacgggaagactcttttcatggatatgttggtt
gagcagacccaccacatttccacatttgatcaaaacagtgagaagcatatgagatacaca
gatacacggatagatgagcaagagagaagaatatccatcaaggcagttcccatgtcactg
gttcttgaggatagcaattcgaaatcatacctctgtaatattatggatactcctggtcat
gccaacttctctgatgaaatgactgccgctctcaggcttgctgatggtgctgttttgatt
gttgatgctgctgaaggagtaatggttaatacagagagggctatacgtcatgcaattcaa
gagcgccttcctattgtagttgtgatcaataaagttgacaggctgatcactgaacttaaa
ttgcccccaaaggatgcttaccataagcttaggcatacaattgaagtcatcaataaccac
atctctgctgcatcttcaactgctggaaatgtccaaattattgacccggctgttggaaat
gtttgttttgcaagtgctagtgcaggatggtctttcactttgcaatcatttgctaaacta
tatgtcaaactccatggcataccattcgatgcaaataaatttgcgtcccgtctttgggga
gatttctacttcgattctgatacgagagtttttaagaagaaacaacctgcaagtggagtg
gaaaggtcatttgtccagtttgtgctagaaccactctacaaaatatatagccaagtaatt
ggagaacataagaagagtgtggaaacaactcttgcagaacttggtgtgactctcagcaat
gcagcttacaaattaaatgttaggcctttacttaggttggcttgtagttcagcatttggc
tctgcaacaggctttactgatatgctagttcatcacattccttctgcacaagatgctgca
tctaggaaggttgaacatatttatactggccctagggattcagctatttgcagggccatg
gatgaatgtgatccttctggcccactcatggttaatgtaaccaagttgtaccctaaatct
gattgtagtgtctttgatgcttttggtagggtttatagtggtgaaatccagacagggcag
actgtacgtgttttgggagaaggctattcaccggatgatgaggaggacatgaccataaaa
gaagtaacaaagttatgggtttatcaagctcgttataggatacccataagcaaggctcct
cccggttcttgggttctcattgaaggtgtggatgcttctattatgaaaactgccacgctt
tgtaatctggattatgatgaggatgtgtatatatttcggcctcttcaattcaatactctt
cctgtggtgaaaacagcaactgagcctttaaatccaagtgaacttcccaaaatggtggaa
ggtcttaggaagatcagcaagagctatcctttagcaataactaaagttgaggagtcaggg
gaacacactatcctaggtactggagagttgtatttagattctataatgaaagaccttagg
gagctttattcagaagtggaagtcaaggtggcagatcctgttgtctcattctgtgaaaca
gtggtggagtcttcatcaatgaaatgttttgctgaaacgcccaacaagagaaacaaaatt
acaatgattgcagaaccattggaaaggggacttgctgaggacattgagaatagtgttgta
agtcttgattggcctcgaaagaaaattggtgactttttccagacaaaatatgactgggat
ttgcttgctgcacgtggtatctgggcatttgggcctgataagcagggacccaacattcta
ttagatgacacactttcaagtgaagttgacaagacattgctgaatgctgtgaaggattcc
attgttcaaggattccaatggggtgcacgagaaggtcctctctgtgatgaacctattaga
aatgccaagttcaaaatagttgatgcacgcattgcacctgagccattgcatcggggtagt
ggtcagatcattccaacagctcgacgtgtggcttattcggccttccttatggcaacccca
cggctaatggagccagtgtattatgtggagatacaaacacctatagattgtgtctctgca
atctacacggttttgtcgcggaggcgtgggcatgtcacagccgatgttcctcaacctgga
accccagcttatattgtcaaggcatttttacctgtgatcgaatcatttggctttgagaca
gacctgaggtatcatacccaaggacaggcattctgcctctctgtgtttgatcattgggca
atagtacccggtgaccctcttgacaagagtatagttttaagaccactcgagcctgcaccc
attcaacacctggctcgtgagtttatggtgaagacaagacgtagaaagggaatgagcgaa
gatgtgagcataaacaaatttttcgatgaggccatggtggtggagctagcccagcaggca
gctgatcttcatcagcaaatgatttaa
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