Camellia sinensis (tea plant): 114309717
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Entry
114309717 CDS
T07364
Name
(RefSeq) ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114309717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114309717
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114309717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
NACHT
ORC-CDC6-like
AAA_28
AAA
AAA_15
SMC_N
AAA_18
AAA_23
ATP-synt_ab
AAA_22
AAA_25
SRP54
AAA_5
AAA_30
Zeta_toxin
AAA_24
PduV-EutP
AAA_33
AAA_14
Arf
Motif
Other DBs
NCBI-GeneID:
114309717
NCBI-ProteinID:
XP_028111303
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MEEKNWSSIEVSGMQFGYDGQSPVFIDFTLKILPGSRCLLVGANGSGKTTLLKILAGKHM
VGGRDVVRVLNCSAFHDTHLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEG
VDPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARL
DLLDFFKEECEQRGATIVYATHIFDGLETWATDLAYIHAGELKRTDKLSELGELKNSANL
LSVVESWLRSETNTEKKKPTNPPAENQKTSPFDSSPFRSSRHMAYYR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagaattggagcagtattgaagtgagtggtatgcaattcggttacgatggc
caatcaccggtattcatcgacttcaccctcaagatcttgcccggatctcgatgccttctc
gtcggcgccaatggttctgggaagaccactttgctgaagattttggctgggaagcatatg
gttggtggaagagatgttgtgcgggtgctgaattgttcagcttttcatgacacacatcta
gtctgtagtggtgatttatcctatttgggaggatcttggagtaaaactgttgggtctgct
ggagagattccacttcaaggagacttctctgctgaacatatgatattcggagttgaaggg
gttgatcctgttagacgagagaagctaattgaattgctagacattgatctacaatggcga
atgcacaaggtttctgatggtcagcgacgtcgagtccaaatctgcatgggtctccttcat
ccttttcaggttcttttgctagatgaggttacagttgatttagatgttgtcgcaaggctg
gatttgctggacttcttcaaggaagaatgtgagcagagaggagctaccattgtgtatgca
acccatatttttgatggactggaaacatgggcgacagatcttgcatatatccatgctggt
gagttaaagaggactgataaattatccgagcttggtgagttgaagaactctgccaatctg
ctttcagtggtcgagtcttggcttcgttctgaaacgaatactgagaaaaagaaacccacc
aatcctccagctgaaaaccagaaaacttctcccttcgattcctctccttttaggtcatcc
agacacatggcctactatcgttga
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