KEGG   Camellia sinensis (tea plant): 114312744
Entry
114312744         CDS       T07364                                 
Name
(RefSeq) DNA repair protein RAD16-like
  KO
K15083  DNA repair protein RAD16
Organism
csin  Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:csin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csin03400]
    114312744
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NER4 complex
      114312744
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX DEAD zf-RING_5 zf-RING_2 Prok-RING_4 zf-C3HC4_4 FAD_binding_2 zf-RING_6
Other DBs
NCBI-GeneID: 114312744
NCBI-ProteinID: XP_028114820
LinkDB
Position
Unknown
AA seq 912 aa
MEGKGSQCNDSTGEDSDHVICLSSDSDSVIHLSSDNEGEHFLSTMEENEGREVWDLDSVP
KDWVGVSDQEDSASDSNLEYRMPKWNKMGGPSHDREEFRVQEEVGLVISNGEELQDLEMD
IDFPVLKKMRNEKTRKRKKDKRTLKWEVWEEDQNRWVENNMMNDIDLENQNEVITETCDA
SSDLVMPLLRYQKEWLAWALKQEESSTRGGILADEMGMGKTIQAIALVLAKREIRRAVSE
PIGHSPSPSSSTALPEIKGTLVICPMVAVRQWENEVDRFTTKGSNMVLVYHGAKREKSLQ
QFFEYDFVITTYSIVESEYRKTVMPPKQKCQWCGKLFSESKMSTHLKLCGPDAVRTDKQS
KQRRKGAKISGKMLKLSVSTDGQSSESEGDEKWVVFKRAMKLNTEENDLGIGSSKDNSAG
VEQGVLRRKSILHSVKWDRIILDEAHYIKGRSCNTTKAILALESSYKWALSGTPVQNRVG
ELYSLVRFLQIFPYSYYFCKDCDCKSLDYRSSTSCPNCPHSFGRHFCWWNKYVSTPIQKR
GNSGEGRKAMLLLKHKILKSTMLRRTKKGREEDLALPPRIITLRWDTLDIKEEDYYTSLN
NDSQAQFNTYVEAGTLMNNYAHIFVLLTRLRQAVDHPYLVVYSRTAAGSGSLDDAGNGEQ
VCGLCHDTVEDPVVASCAHIFCKSCFINFPASTGQVLCPSCSEPLTVDFSTNVDHGVQNS
KTTIKGFKPSSILNRICLDNFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLIH
YSLQKSGITCAQLVGSMSMSARDAAILRFTNNPDCKIFLMSLKAGGVALNLTVASHVFLM
DPWWNPAAERQAQDRIHRIGQYKPIKVVRFVIENTIEERILELQKKKELVFEGLVQIVYV
HWDTRQILEPPG
NT seq 2739 nt   +upstreamnt  +downstreamnt
atggaaggcaaaggctcccagtgtaatgatagcaccggtgaagatagcgatcacgtgata
tgtttgagttcagatagcgatagtgttatacatttgagttctgataatgaaggtgaacat
tttttgagcacaatggaagagaatgaagggagagaggtttgggacttggattctgtgcca
aaggattgggttggagttagtgatcaagaagatagtgcaagtgattctaatcttgagtat
aggatgccaaagtggaataaaatgggaggcccgagtcacgacagagaggaattcagagtg
caagaggaagtggggttggttataagtaatggtgaagaactacaggatcttgagatggat
attgattttcctgtattgaagaagatgagaaatgagaagactaggaaaaggaaaaaagat
aaaaggaccctgaagtgggaagtttgggaagaagaccaaaacagatgggttgaaaacaat
atgatgaatgatattgatctggaaaatcagaatgaagtgatcactgaaacttgtgatgca
tcttcagatttggttatgcctctgctgaggtaccagaaggaatggttggcatgggctttg
aagcaagaggagtcttccacaagaggggggatccttgctgatgagatggggatggggaag
actattcaagcaattgcccttgtcttagctaaacgggaaatcagacgagcagtttcagaa
cccattggacactcaccttcaccctcttcatccactgcattgcctgaaattaaaggaacc
ctcgttatttgtccaatggttgctgtgagacagtgggaaaatgaggttgatcggttcacc
acaaaaggaagcaacatggtactggtgtatcatggggccaaaagggaaaagagtcttcaa
caattctttgaatatgattttgtcataacgacatactccattgttgagtctgaatatagg
aaaactgtgatgccacccaaacagaagtgccagtggtgtgggaaattattttctgaaagt
aagatgtctactcacttgaaattgtgtgggcctgacgctgttagaacagataagcagtca
aaacaacggaggaagggggctaaaatttcaggaaaaatgttaaagctatctgtgtctact
gacggccaatccagtgaatctgagggtgacgaaaagtgggttgtgttcaaaagggctatg
aagctgaacactgaggaaaatgatttaggaattggctcttccaaggataattcagcaggt
gttgaacaaggtgtgctcagaaggaaatctattttgcactctgtgaaatgggatcgcatt
attttggatgaggctcattatataaaaggtagaagttgcaataccacaaaagctatcctt
gctttagagtcttcatacaaatgggctttaagtggaactcctgttcagaatcgtgttgga
gaactttattcactggtccgcttcctacagatattcccttactcttattacttctgtaag
gattgtgactgcaaatcacttgattacagatcgtcaactagttgtccaaactgccctcat
agttttgggaggcacttttgctggtggaacaagtatgtgtctacaccaatacaaaaacgt
gggaattctggtgagggtagaaaagcaatgctcttgttaaagcacaaaattttgaagagc
acaatgctgagacgcactaaaaagggtagggaagaagatcttgcactgcctccaagaatt
attacattgagatgggacactctggatatcaaagaagaagactattatacatcattgaac
aacgacagtcaagcgcaatttaatacatatgttgaggcaggaactctgatgaataactat
gctcatatatttgtcctcctcacacgactgcggcaggcagttgatcacccttaccttgtg
gtatattctagaactgctgctggaagtggaagtttggatgatgctggtaatggtgagcaa
gtatgtggcttatgtcatgacacagtagaagatcctgtggtcgcatcatgtgcgcacatc
ttctgtaagtcttgtttcatcaatttccctgctagtacgggacaagtcttatgcccttca
tgttcagaaccacttactgttgacttcagtacaaatgtggatcatggagttcagaattct
aaaacaaccattaaagggtttaaaccatcaagtattctaaaccggatctgccttgacaat
ttccagacaagtacaaaaattgaggctttgagagaagaaatcagattcatggttgaaagc
gatggttctgcaaaaggaatcgtttttagccaattcacgtcattcttggatctgatacac
tactccctccagaagtccggcattacttgtgctcaattagtggggtccatgtccatgagt
gctagagatgctgcaattttgagatttaccaacaatccagattgcaaaatcttccttatg
agcttgaaagctggaggtgtcgccctgaatctcacagttgcatcacatgttttcctgatg
gatccctggtggaatccagctgcagagcgacaagcccaagatagaatccaccgaatagga
caatataaacctatcaaggttgtgagatttgtcattgagaacacaattgaggaaagaatt
ttggagttgcagaagaagaaggaactagtctttgaagggttagttcaaattgtctacgtg
cattgggatactcgccaaattttagaacctcctgggtga

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