Camellia sinensis (tea plant): 114312744
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Entry
114312744 CDS
T07364
Name
(RefSeq) DNA repair protein RAD16-like
KO
K15083
DNA repair protein RAD16
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114312744
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
114312744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
DEAD
zf-RING_5
zf-RING_2
Prok-RING_4
zf-C3HC4_4
FAD_binding_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
114312744
NCBI-ProteinID:
XP_028114820
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MEGKGSQCNDSTGEDSDHVICLSSDSDSVIHLSSDNEGEHFLSTMEENEGREVWDLDSVP
KDWVGVSDQEDSASDSNLEYRMPKWNKMGGPSHDREEFRVQEEVGLVISNGEELQDLEMD
IDFPVLKKMRNEKTRKRKKDKRTLKWEVWEEDQNRWVENNMMNDIDLENQNEVITETCDA
SSDLVMPLLRYQKEWLAWALKQEESSTRGGILADEMGMGKTIQAIALVLAKREIRRAVSE
PIGHSPSPSSSTALPEIKGTLVICPMVAVRQWENEVDRFTTKGSNMVLVYHGAKREKSLQ
QFFEYDFVITTYSIVESEYRKTVMPPKQKCQWCGKLFSESKMSTHLKLCGPDAVRTDKQS
KQRRKGAKISGKMLKLSVSTDGQSSESEGDEKWVVFKRAMKLNTEENDLGIGSSKDNSAG
VEQGVLRRKSILHSVKWDRIILDEAHYIKGRSCNTTKAILALESSYKWALSGTPVQNRVG
ELYSLVRFLQIFPYSYYFCKDCDCKSLDYRSSTSCPNCPHSFGRHFCWWNKYVSTPIQKR
GNSGEGRKAMLLLKHKILKSTMLRRTKKGREEDLALPPRIITLRWDTLDIKEEDYYTSLN
NDSQAQFNTYVEAGTLMNNYAHIFVLLTRLRQAVDHPYLVVYSRTAAGSGSLDDAGNGEQ
VCGLCHDTVEDPVVASCAHIFCKSCFINFPASTGQVLCPSCSEPLTVDFSTNVDHGVQNS
KTTIKGFKPSSILNRICLDNFQTSTKIEALREEIRFMVESDGSAKGIVFSQFTSFLDLIH
YSLQKSGITCAQLVGSMSMSARDAAILRFTNNPDCKIFLMSLKAGGVALNLTVASHVFLM
DPWWNPAAERQAQDRIHRIGQYKPIKVVRFVIENTIEERILELQKKKELVFEGLVQIVYV
HWDTRQILEPPG
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaaggctcccagtgtaatgatagcaccggtgaagatagcgatcacgtgata
tgtttgagttcagatagcgatagtgttatacatttgagttctgataatgaaggtgaacat
tttttgagcacaatggaagagaatgaagggagagaggtttgggacttggattctgtgcca
aaggattgggttggagttagtgatcaagaagatagtgcaagtgattctaatcttgagtat
aggatgccaaagtggaataaaatgggaggcccgagtcacgacagagaggaattcagagtg
caagaggaagtggggttggttataagtaatggtgaagaactacaggatcttgagatggat
attgattttcctgtattgaagaagatgagaaatgagaagactaggaaaaggaaaaaagat
aaaaggaccctgaagtgggaagtttgggaagaagaccaaaacagatgggttgaaaacaat
atgatgaatgatattgatctggaaaatcagaatgaagtgatcactgaaacttgtgatgca
tcttcagatttggttatgcctctgctgaggtaccagaaggaatggttggcatgggctttg
aagcaagaggagtcttccacaagaggggggatccttgctgatgagatggggatggggaag
actattcaagcaattgcccttgtcttagctaaacgggaaatcagacgagcagtttcagaa
cccattggacactcaccttcaccctcttcatccactgcattgcctgaaattaaaggaacc
ctcgttatttgtccaatggttgctgtgagacagtgggaaaatgaggttgatcggttcacc
acaaaaggaagcaacatggtactggtgtatcatggggccaaaagggaaaagagtcttcaa
caattctttgaatatgattttgtcataacgacatactccattgttgagtctgaatatagg
aaaactgtgatgccacccaaacagaagtgccagtggtgtgggaaattattttctgaaagt
aagatgtctactcacttgaaattgtgtgggcctgacgctgttagaacagataagcagtca
aaacaacggaggaagggggctaaaatttcaggaaaaatgttaaagctatctgtgtctact
gacggccaatccagtgaatctgagggtgacgaaaagtgggttgtgttcaaaagggctatg
aagctgaacactgaggaaaatgatttaggaattggctcttccaaggataattcagcaggt
gttgaacaaggtgtgctcagaaggaaatctattttgcactctgtgaaatgggatcgcatt
attttggatgaggctcattatataaaaggtagaagttgcaataccacaaaagctatcctt
gctttagagtcttcatacaaatgggctttaagtggaactcctgttcagaatcgtgttgga
gaactttattcactggtccgcttcctacagatattcccttactcttattacttctgtaag
gattgtgactgcaaatcacttgattacagatcgtcaactagttgtccaaactgccctcat
agttttgggaggcacttttgctggtggaacaagtatgtgtctacaccaatacaaaaacgt
gggaattctggtgagggtagaaaagcaatgctcttgttaaagcacaaaattttgaagagc
acaatgctgagacgcactaaaaagggtagggaagaagatcttgcactgcctccaagaatt
attacattgagatgggacactctggatatcaaagaagaagactattatacatcattgaac
aacgacagtcaagcgcaatttaatacatatgttgaggcaggaactctgatgaataactat
gctcatatatttgtcctcctcacacgactgcggcaggcagttgatcacccttaccttgtg
gtatattctagaactgctgctggaagtggaagtttggatgatgctggtaatggtgagcaa
gtatgtggcttatgtcatgacacagtagaagatcctgtggtcgcatcatgtgcgcacatc
ttctgtaagtcttgtttcatcaatttccctgctagtacgggacaagtcttatgcccttca
tgttcagaaccacttactgttgacttcagtacaaatgtggatcatggagttcagaattct
aaaacaaccattaaagggtttaaaccatcaagtattctaaaccggatctgccttgacaat
ttccagacaagtacaaaaattgaggctttgagagaagaaatcagattcatggttgaaagc
gatggttctgcaaaaggaatcgtttttagccaattcacgtcattcttggatctgatacac
tactccctccagaagtccggcattacttgtgctcaattagtggggtccatgtccatgagt
gctagagatgctgcaattttgagatttaccaacaatccagattgcaaaatcttccttatg
agcttgaaagctggaggtgtcgccctgaatctcacagttgcatcacatgttttcctgatg
gatccctggtggaatccagctgcagagcgacaagcccaagatagaatccaccgaatagga
caatataaacctatcaaggttgtgagatttgtcattgagaacacaattgaggaaagaatt
ttggagttgcagaagaagaaggaactagtctttgaagggttagttcaaattgtctacgtg
cattgggatactcgccaaattttagaacctcctgggtga
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