KEGG   Camellia sinensis (tea plant): 114312772
Entry
114312772         CDS       T07364                                 
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:csin00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    114312772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114312772
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     114312772
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 114312772
NCBI-ProteinID: XP_028114869
LinkDB
Position
Unknown
AA seq 948 aa
MGVPAFYKWLADRYPQSISDVVEEEPRELVNGVFFPVDISKPNPNGMEFDNMYLDMNGII
HPCFHPEGKPAPATYDDVFKSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAAAAEAEEERLRKEFEAEGRNLTHKEKAETSDTNVITPGTQFMAVLSVALQYYI
QSRLNHNPGWWSTKVILSDANVPGEGEHKIMSYIRLQRNLPGFNPNTRHCLYGLDADLIM
LSLATHEVHFSILREVITFPGQQEKCFLCGEAGHLAAECRGRPGGQDTVNGKVVDNTPIH
KKKYQFLNIWVLREYLQYDLEIPNPPFEINFERLVDDFVFLCFFVGNDFLPHMPTLEIRE
GAINLLMSVYRKEFAAIGGYLTDAGEVLLDRVEHFIQSVAVFEDQIFQKRSRIQQAMENN
EEMKLRARKEVSQEPPVPVVDKVKLGEPGYKERYYAEKFDESDPEKIDEIRKDAVLRYVE
GLCWVCQYYYHGVCSWLWFYPYHYAPFASDLNGLTDLEITFFPGEPFKPFDQLMGTLPAT
SSSALPEEYRRLMTDPASPIQEFYPSDFEIDMNGKRFAWQGIAKLPFINEKKLVAETKKL
KDTLTEQEQFRNSVMHDLLYVHYSHPLAAQIMSYYHFFCQLPPDQRYPWPINTNLSGGMN
GHLWLCGRSGWRNVVVSPVRGLQDIEYNQILNTTYLNPAHHKHIAEPPAGIHMPGKILSP
LDIKPFPLLWHEDNGGRRQQNRDRPPILGSISGPRLGEAAHRLLKNTLNLKPNHNNYSES
FQQTPYRNSQSNHVIINRPRAAGPSGYGRGFIDNSSPYYGNYNNPRAITGPPRSAPSQYE
FQGNRQNIKAQDRYSRAGMSALTIDEVRTRPQAMMSLMTPNSGQLQNNGNQFVQNMASLP
SPPPKWINRPPSSSGMYYDQQQKSTASTYEAQVKKVYQVKGLAPPESV
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgggagtgccggcgttctacaagtggctggcggatcggtaccctcagtcgatctccgac
gtggtcgaggaagagcccagggagctcgtcaacggcgtcttcttccccgtcgatatctcc
aaacctaaccctaacggcatggagtttgataacatgtacctcgacatgaatggaattatc
cacccctgttttcatcccgaaggcaagcctgcacctgccacttatgatgatgtatttaaa
tcaatatttgattacattgaccatctattctcattggttcgcccaagaaagcttctttat
atggcaattgatggggttgctccgagagccaaaatgaatcaacaacgttcccggcgcttt
agagcagcaaaggatgctgctgcagcagctgaagctgaggaagaaagattgagaaaagag
tttgaagctgaggggagaaatctgactcacaaagaaaaggctgaaacatctgacacaaat
gtcataactcctggcactcaatttatggcagtgctctcagttgcacttcaatattatata
cagtctaggttgaatcacaaccctggttggtggagtacaaaggtcattctttctgatgca
aatgttcctggtgagggtgaacacaaaatcatgtcttatattcgcctacagcgtaacctt
cctggtttcaatccgaatactcggcattgtttatatggcctggatgcagaccttattatg
ctttctttagcaactcatgaagttcacttctcaatattaagggaggttatcacttttcct
ggacagcaagaaaaatgtttcctttgtggtgaagctggtcatctggctgctgagtgtcgt
ggtaggccgggtggccaagacactgttaatgggaaggtggtggacaacacaccgattcac
aagaagaaatatcagttcctcaacatctgggtgttgcgagaatatttgcaatatgatttg
gagattcccaaccctccttttgagattaactttgagcgattggtggatgactttgtgttt
ctgtgtttctttgttggcaatgactttctcccacatatgccgacattggaaattcgtgag
ggtgctattaatctattgatgtctgtctatagaaaggagtttgctgctataggtggttat
cttactgatgcgggtgaggttttactggacagagtggaacattttatccagtcagttgca
gtctttgaggaccaaatctttcagaagcggtctcgtatacagcaggctatggagaataat
gaagaaatgaagcttagagcaagaaaagaggtttctcaggagccaccagtaccagttgtg
gacaaggtgaaattaggtgagcctggatataaagaaaggtattatgccgagaaatttgat
gaatcagacccagaaaaaattgatgaaattagaaaggatgcagttttgaggtatgtagaa
ggtttatgctgggtttgccagtactactaccatggtgtctgctcatggctatggttttat
ccatatcattatgctccatttgcttccgatctaaatggtctaactgatttagaaataaca
tttttcccgggagagccttttaagcctttcgaccagctaatgggaaccttgcctgctaca
agttctagtgctctgcctgaagagtacaggagattgatgactgatccagcatcaccgatc
caagaattctacccttctgattttgagattgatatgaatggcaagcgctttgcatggcag
ggcattgccaaattgcctttcatcaatgagaagaaattggtcgctgaaacaaagaaactg
aaggacactctgacggagcaagaacaatttcggaatagtgtgatgcatgatttgctatat
gtgcattattctcatcctttggctgcccaaattatgtcatactaccattttttttgtcag
ttacccccagatcaaagatacccttggccaattaacacaaatcttagtggaggaatgaat
gggcatctttggttatgtggaaggagtgggtggaggaatgtggttgtgtcccctgtcagg
ggattgcaagatattgagtataaccaaattttaaatactacctatctgaatcctgcacac
cataaacacatcgccgaacctcccgcaggcatacacatgcctggaaagattttaagtcct
ttggacataaaacccttccctttgttatggcatgaagataatggtggccggcgccagcaa
aacagagataggccacccatactggggtcaatatctggtcctcggttgggagaagcagcg
catcgtttgcttaagaacactctgaatctgaaacccaatcacaacaattattctgaatca
tttcaacaaactccatataggaattcccaaagcaaccatgtaataattaatagaccaaga
gcagctggaccctccgggtatggaaggggattcattgacaattcaagtccctactatgga
aattataataatccccgagccataacaggtcctcctagatctgcgccttctcagtatgaa
ttccaaggcaacagacagaatatcaaggcacaagatagatactcaagggctgggatgtct
gctttgacaattgatgaagtcagaaccaggccacaagcaatgatgtctctgatgacgcca
aattcaggacaattgcaaaataatgggaaccagtttgtgcaaaacatggcttcacttcca
tcaccacctcccaagtggatcaatagaccgcctagtagttctggaatgtactatgaccaa
caacagaagtcaacagcttcaacatatgaagctcaagtgaagaaagtttatcaagtgaag
ggtctggcgcccccagaatctgtctga

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