Camellia sinensis (tea plant): 114315931
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Entry
114315931 CDS
T07364
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114315931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114315931
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114315931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
Arf
AAA_23
ORC-CDC6-like
AAA
nSTAND3
AAA_30
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-GeneID:
114315931
NCBI-ProteinID:
XP_028118372
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAVKENSNPTVGINNLSFTYPGIDGHPPPGSTPLIHDFSLTLHPGNRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAFAGFEVPIQMDVS
AEKMICGVSGIDPQRRAELIKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPSHIVYVAHGKLQLAMPMDK
VKETSNLSLMRTVEQWLRKERDEARKRRKERKANGLPEFEKHVDGSRVTGDPALAAARAL
NNGWAAGRLNSTIAGEENFVFSSNRVLRQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggagaattcgaatccaacggtcgggatcaacaatctcagcttcacctac
cccggaatcgacggccatcctccgcctggctccacccccctcattcacgacttctctctc
actctccaccccggcaatcgctgtctcctcgttggatccaacggcgcaggtaagacgaca
attctgaagatattgggagggaagcacatggtggagcctcacatggttcgcgttttgggg
agatcggcttttcatgataccgctttgacctcttctggtgacctctgctatcttggagga
gagtggaggcgagatgttgcttttgctggttttgaggttccaatacaaatggatgtttct
gctgagaagatgatttgtggtgtgtcgggaattgatcctcaaagaagagctgaactgatc
aaggttttagatgttgatctatcatggagattgcacaaagtatcagatggtcagagaaga
cgcgtgcagatttgtatgggtctgttaaagccattcaaggtacttcttcttgatgaaatc
accgttgaccttgatgttcttgcgagggctgacctgttgaagtttcttcgaaaggaatgt
gaagagcgtggtgctacaattatttatgccacacatatatttgatggtctggaggattgg
ccatcacatattgtttatgtggctcatgggaagttgcaattagcaatgccaatggataaa
gttaaggagaccagcaatttgtcactgatgagaactgtagaacagtggctgaggaaagaa
agagatgaggcaaggaagagaaggaaagaaaggaaggcaaatggtcttccagaatttgag
aaacatgttgatggcagtcgtgtgactggcgatccagcccttgctgctgcacgtgcattg
aacaatggttgggctgcgggaaggctcaattccaccattgctggtgaagagaattttgtg
ttcagctcaaacagagtactaagacaataa
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