Coccomyxa subellipsoidea: COCSUDRAFT_11877
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Entry
COCSUDRAFT_11877 CDS
T02914
Name
(RefSeq) O-phosphoseryl-tRNA selenium transferase
KO
K03341
O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase [EC:
2.9.1.2
]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl00450
Selenocompound metabolism
csl00970
Aminoacyl-tRNA biosynthesis
csl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
COCSUDRAFT_11877
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCSUDRAFT_11877
Enzymes [BR:
csl01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.2 O-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase
COCSUDRAFT_11877
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SepSecS
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
17045026
NCBI-ProteinID:
XP_005651056
JGI:
11877
UniProt:
I0Z793
LinkDB
All DBs
AA seq
473 aa
AA seq
DB search
MDLQNTDLASGLVSSTYIQQGADALSTRRRLIKTLLSQRCLPKVGWDEDTVELFIKDAAF
MDSNNFLSSVGVGEREARVANRLVAKRHFGLAHGIGRSGDVAAEQPKAAGSSLLAKLTNI
LVQDALKVAGMLDVGAVTVLPLATGMALTMTLLALKAKRPQARYVLWPRIDQKTCLKAIV
SANLEAVPVPCNLEGDELRTNVPLLRAEIERLTPASIVCIVTTTSCFAPRGADSLVEVAK
LCMDADIGHIVNNAYGVQSAALCALVTSAWRKGRVDAVVQSTDKNFMVPVGGAVVAASKQ
DPSLVAAVNKAYPGRASISPLLDLLITLLQWGESGWRNVLQQREAVYWRALDKLRDFAEA
IGERVLDTPNNPISIGLTLTSLQQSSTASRTKPTTFLGSMLFKRAVSGCRVVARGKEQSV
AGHCFTGYGAHCDAYPCDYLTFAAALGTTEEDVNEFLRRLNLCIKEFKKQNCK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggacctacagaacacagatttggcatcaggcctcgtgtcttccacctacatacagcaa
ggtgcagacgccctgagcacacgccgccgactgatcaagaccttgctttcccagcgatgt
ctgccgaaagttggttgggatgaagacactgtagaattgttcatcaaggacgcagcattt
atggacagcaacaatttcttgagcagtgtgggagttggagagcgagaggctcgggtcgcc
aaccgcttggtcgcgaagagacattttggactagcccatggcattggccgatcaggggac
gttgcagctgagcagccaaaggctgcagggtcctcattactagccaagctgaccaacatt
ctagtgcaagatgccctcaaggtggcaggaatgctggatgttggagcagtcactgtactg
ccacttgcaacaggcatggcattgactatgacactgctcgccttgaaggcaaagagacct
caggcaaggtacgtactgtggccgcgcatcgatcagaagacatgcctgaaggcaatagtg
tcagcgaatcttgaggctgtgccggtgccctgtaatctggaaggggatgagctgcggacg
aacgtgcccctgctgcgcgctgagatcgagcgcctcacccctgccagcatcgtctgcatc
gtcaccaccacctcatgctttgcaccgcggggtgcagactcacttgtggaggtcgccaag
ctctgcatggacgcagacattggtcacattgtcaacaacgcctatggcgtgcagtctgca
gccctctgtgccctggtgacatcggcgtggcggaaggggcgtgtggatgcggtggtgcag
tcgactgacaagaacttcatggtgcctgtgggcggcgccgtggtggccgccagcaagcag
gacccctctcttgttgccgctgtgaacaaggcttatcctgggagggcttctatttcaccg
ctgttggacctgctcatcacactgctgcagtggggcgagagcggctggcgaaatgttctg
caacagagggaagcagtgtattggcgtgcattggataaactgagggactttgctgaggcc
attggggagcgcgtcctggacactccaaacaacccaatctcaataggcctcaccctcacg
agtttgcagcaatcctctacagcgagcaggacaaagccgactacgtttcttgggtccatg
ctgttcaagagggcggtgtctggatgcagagtggtggctaggggtaaggagcagagcgtg
gcagggcactgctttacagggtacggtgcccactgtgatgcttacccatgtgactatctg
acatttgcagctgctctgggaaccacggaggaggatgtgaatgagtttcttaggaggcta
aacctgtgcatcaaggagttcaagaagcagaattgtaaataa
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