Coccomyxa subellipsoidea: COCSUDRAFT_21937
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Entry
COCSUDRAFT_21937 CDS
T02914
Name
(RefSeq) ran-like small GTPase
KO
K07936
GTP-binding nuclear protein Ran
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03008
Ribosome biogenesis in eukaryotes
csl03013
Nucleocytoplasmic transport
csl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCSUDRAFT_21937
03008 Ribosome biogenesis in eukaryotes
COCSUDRAFT_21937
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
COCSUDRAFT_21937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csl03019
]
COCSUDRAFT_21937
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_21937
03016 Transfer RNA biogenesis [BR:
csl03016
]
COCSUDRAFT_21937
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_21937
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csl04147
]
COCSUDRAFT_21937
04031 GTP-binding proteins [BR:
csl04031
]
COCSUDRAFT_21937
Messenger RNA biogenesis [BR:
csl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
COCSUDRAFT_21937
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
COCSUDRAFT_21937
Pre-60S particles
COCSUDRAFT_21937
Transfer RNA biogenesis [BR:
csl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
COCSUDRAFT_21937
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
COCSUDRAFT_21937
Spindle formation proteins
COCSUDRAFT_21937
Exosome [BR:
csl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
COCSUDRAFT_21937
GTP-binding proteins [BR:
csl04031
]
Small (monomeric) G-proteins
Ran Family
Ran
COCSUDRAFT_21937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RNA_helicase
ATPase
Pox_A32
AAA_24
AAA_7
ArgoMid
TsaE
AAA_22
AAA_16
DUF815
DUF5906
Motif
Other DBs
NCBI-GeneID:
17044864
NCBI-ProteinID:
XP_005651398
JGI:
21937
UniProt:
I0Z885
LinkDB
All DBs
AA seq
222 aa
AA seq
DB search
MALPGQTTPEGVPAFKLVLVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNR
GKLRFFCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCEGIP
IVLCGNKVDVKNRQVKPKQVTFHRKKNLQYHEISAKSNYNYEKPFLYLARKLVGDPNLHF
VEQVALKPPEVVIDTVQQAQYEQQLQDAANAPLPDEDDDIAE
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccagggcagacaactcccgaaggagtaccagcatttaaattggtgctggtg
ggtgatggaggcacaggcaaaaccacttttgtaaagcgccatctcacaggagagttcgag
aagaagtacgaacccaccattggtgtggaggtgcacccgctggacttcaccacaaaccga
ggcaagctccgcttcttctgctgggacaccgccggccaggagaagtttggcggcctacgt
gatggctactacatccatggccagtgcgccatcatcatgtttgacgtcacctcccgcctc
acctacaagaatgtgcctacatggcaccgcgacctctgcagggtctgcgaaggcatacca
atcgtgctgtgtgggaataaggtggacgtcaagaaccgccaagtgaagcccaagcaggtc
acctttcacaggaagaagaacttgcagtaccatgagatctcagcaaagagcaactacaac
tacgagaagccctttctctatctggctcgcaagctcgtcggggaccccaacctgcacttt
gtggagcaggtggcgctgaagccgcctgaggtggtcatcgacacagtgcagcaggcgcag
tacgagcagcagctgcaggatgctgccaacgctcccctgcccgatgaggatgatgacatc
gcagagtag
DBGET
integrated database retrieval system