KEGG   Coccomyxa subellipsoidea: COCSUDRAFT_21937
Entry
COCSUDRAFT_21937  CDS       T02914                                 
Name
(RefSeq) ran-like small GTPase
  KO
K07936  GTP-binding nuclear protein Ran
Organism
csl  Coccomyxa subellipsoidea
Pathway
csl03008  Ribosome biogenesis in eukaryotes
csl03013  Nucleocytoplasmic transport
csl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    COCSUDRAFT_21937
   03008 Ribosome biogenesis in eukaryotes
    COCSUDRAFT_21937
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    COCSUDRAFT_21937
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csl03019]
    COCSUDRAFT_21937
   03009 Ribosome biogenesis [BR:csl03009]
    COCSUDRAFT_21937
   03016 Transfer RNA biogenesis [BR:csl03016]
    COCSUDRAFT_21937
   03036 Chromosome and associated proteins [BR:csl03036]
    COCSUDRAFT_21937
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csl04147]
    COCSUDRAFT_21937
   04031 GTP-binding proteins [BR:csl04031]
    COCSUDRAFT_21937
Messenger RNA biogenesis [BR:csl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     COCSUDRAFT_21937
Ribosome biogenesis [BR:csl03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    COCSUDRAFT_21937
  Pre-60S particles
    COCSUDRAFT_21937
Transfer RNA biogenesis [BR:csl03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    COCSUDRAFT_21937
Chromosome and associated proteins [BR:csl03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     COCSUDRAFT_21937
   Spindle formation proteins
    COCSUDRAFT_21937
Exosome [BR:csl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   COCSUDRAFT_21937
GTP-binding proteins [BR:csl04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    COCSUDRAFT_21937
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase ATPase Pox_A32 AAA_24 AAA_7 ArgoMid TsaE AAA_22 AAA_16 DUF815 DUF5906
Other DBs
NCBI-GeneID: 17044864
NCBI-ProteinID: XP_005651398
JGI: 21937
UniProt: I0Z885
LinkDB
AA seq 222 aa
MALPGQTTPEGVPAFKLVLVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNR
GKLRFFCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCEGIP
IVLCGNKVDVKNRQVKPKQVTFHRKKNLQYHEISAKSNYNYEKPFLYLARKLVGDPNLHF
VEQVALKPPEVVIDTVQQAQYEQQLQDAANAPLPDEDDDIAE
NT seq 669 nt   +upstreamnt  +downstreamnt
atggctctgccagggcagacaactcccgaaggagtaccagcatttaaattggtgctggtg
ggtgatggaggcacaggcaaaaccacttttgtaaagcgccatctcacaggagagttcgag
aagaagtacgaacccaccattggtgtggaggtgcacccgctggacttcaccacaaaccga
ggcaagctccgcttcttctgctgggacaccgccggccaggagaagtttggcggcctacgt
gatggctactacatccatggccagtgcgccatcatcatgtttgacgtcacctcccgcctc
acctacaagaatgtgcctacatggcaccgcgacctctgcagggtctgcgaaggcatacca
atcgtgctgtgtgggaataaggtggacgtcaagaaccgccaagtgaagcccaagcaggtc
acctttcacaggaagaagaacttgcagtaccatgagatctcagcaaagagcaactacaac
tacgagaagccctttctctatctggctcgcaagctcgtcggggaccccaacctgcacttt
gtggagcaggtggcgctgaagccgcctgaggtggtcatcgacacagtgcagcaggcgcag
tacgagcagcagctgcaggatgctgccaacgctcccctgcccgatgaggatgatgacatc
gcagagtag

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