Cyanobacterium stanieri: Cyast_0751
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Entry
Cyast_0751 CDS
T02377
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
csn
Cyanobacterium stanieri
Pathway
csn03030
DNA replication
csn03410
Base excision repair
csn03420
Nucleotide excision repair
csn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cyast_0751
03410 Base excision repair
Cyast_0751
03420 Nucleotide excision repair
Cyast_0751
03430 Mismatch repair
Cyast_0751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csn03032
]
Cyast_0751
03400 DNA repair and recombination proteins [BR:
csn03400
]
Cyast_0751
Enzymes [BR:
csn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Cyast_0751
DNA replication proteins [BR:
csn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Cyast_0751
DNA repair and recombination proteins [BR:
csn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Cyast_0751
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cyast_0751
MMR (mismatch excision repair)
DNA ligase
Cyast_0751
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cyast_0751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
BRCT_2
HHH
Ribosomal_S13
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
AFZ46724
UniProt:
K9YIR3
LinkDB
All DBs
Position
839998..842022
Genome browser
AA seq
674 aa
AA seq
DB search
MTVIATDIINRVEQLKAKLQEASYAYYVLDNPVMEDAVYDQLYRELQTLEKEYPQLITKD
SPTQRVGDKLDSQFRSVKHNIPLYSLDNAFNFDELKQWEIRWQKQLSSLPEFDYVCELKI
DGSAIALTYENGILTRGLTRGDGITGEDITNNLRTIRSIPLKLNLENPPPILEVRGEALL
PLQEFTRINQERQKNQENLFANPRNATAGTLRQLDPNIVSERKLQFFAYNLYLQSDNFVI
NSQQEALNFLNKIGFLVNPNYKICSSLEQVINYCNHWENNRQKLPYMTDGIVIKINSLSL
QNQLGFTQKFPRWAIALKYPADETPTIVEKITVNVGRTGAVTPMAIMKPVQLAGTTVQRA
TLHNYDFLQQLDIRVGDTVVIRKAGEIIPEVVRVIPDLRPDNTHPFEFPSHCPECGSSLI
RPENEAVTRCVNNSCPAILRGSLIHWASRQAMDIRGLGEKVVTLLMEHKLIKSIADIYKL
KAFEIAELERMGEKSAQNLINAIEESKNQPFAKVLYGLGIRYVGAVNAQILADNFQNIDT
LASSKITDLEAINGIGKEIANSVVDWFNVEENQQLIDQLKNYNLKLHNEQKSSEKQVNKS
NLHRKIFVITGTLNNFTRTEAKNLIQSHGGKVTTSISNKTNYLLAGEKAGSKLTKAQELG
IKIISESDLLNLVD
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttattgccactgatattattaatcgagttgaacaattaaaagcgaaattgcag
gaagctagttatgcttattatgtattagataatcctgtgatggaggatgctgtttatgat
caactttatcgagaattacagactttggaaaaggaatatcctcagttaattactaaagat
agtccaactcaaagggtgggagataaattagattctcagtttcgttctgttaaacataat
attcctctttatagtttagataatgcttttaattttgatgagttaaaacaatgggaaatt
agatggcaaaaacaattatcttctctcccagaatttgattatgtttgtgagttgaaaatt
gatggaagtgcgatcgcccttacctatgaaaatggtattttaacaaggggtttaacccgt
ggagacggcatcacaggggaagacatcaccaacaacttacgcaccattcgctccattccc
ctgaaattaaatttagaaaatccccccccgatattagaagtaagaggagaggcactatta
cccctccaagaatttacgagaattaatcaagaaaggcaaaaaaatcaagaaaatttattt
gctaatcctcgtaacgccaccgcaggaacattaaggcaattagatcctaatattgtgagt
gaaagaaagttacaattttttgcttataatttatatttacaatctgataattttgttatt
aatagtcaacaagaagcccttaattttttaaataaaataggttttttagtcaatcctaac
tacaaaatttgttcatccttagaacaggtaataaactattgcaaccattgggaaaataat
cgccaaaagctaccctacatgactgatggtatcgtcatcaaaattaactccctatccctt
caaaatcaactcggtttcacccaaaaattcccccgatgggcgatcgcccttaaataccct
gccgatgaaacccccaccatcgtagaaaaaataaccgtcaacgtaggacgcacaggggca
gtaactcccatggcgatcatgaaaccagtacaactagcaggaaccaccgtacaaagagcc
actttacataactacgactttttgcaacaattagatattagagtgggagataccgtagtt
attcgtaaagcaggggaaattatccccgaagtagtaagagtaatccccgacttacgcccc
gacaatacccaccccttcgagtttcctagccactgcccagaatgtggttcatccttaata
cgccccgaaaatgaagccgttacccgttgtgtcaacaactcctgccctgccattttacgg
ggtagtctcatccattgggcttcccgtcaagcaatggacatcagaggtttaggagaaaaa
gtcgtcacccttttgatggaacacaaattaatcaaatccatcgctgatatatataaatta
aaagcctttgagattgccgaactagagcgcatgggggaaaaatctgcccaaaatttaatc
aatgccattgaagaaagtaaaaatcaaccttttgccaaagttttatatggtttaggtatt
cgttatgtaggggctgttaatgctcagattttagccgataattttcaaaatatagatact
ttggctagtagtaaaattactgatttggaagccataaatggcattggcaaagaaattgcg
aactcagtagtggactggtttaatgttgaggaaaaccaacaattaattgaccaattaaaa
aactataatcttaaattacataatgaacaaaaatcatcagaaaaacaggtaaataaatct
aatttacacagaaaaatattcgtcattacaggaactttaaataattttacaagaaccgaa
gccaaaaatttaattcaatcccatggaggaaaagtcaccacttctataagtaataaaacc
aattatttattagcaggagaaaaagcaggttctaaattaacaaaagctcaagaactaggt
attaaaattatttctgaatcagatttattaaaccttgttgattaa
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