Clostridium cf. saccharolyticum K10: CLS_04690
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Entry
CLS_04690 CDS
T02614
Name
(GenBank) Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
cso
Clostridium cf. saccharolyticum K10
Pathway
cso01502
Vancomycin resistance
cso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLS_04690
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CLS_04690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cso02022
]
CLS_04690
01504 Antimicrobial resistance genes [BR:
cso01504
]
CLS_04690
Two-component system [BR:
cso02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
CLS_04690
Antimicrobial resistance genes [BR:
cso01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
CLS_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
GerE
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
CBK76290
LinkDB
All DBs
Position
complement(468458..469150)
Genome browser
AA seq
230 aa
AA seq
DB search
MQDKILIVDDEQEIADLVSLYLTNEGFQVFKFYNAADAWSCIQTENLDLAILDVMLPDMN
GFELCQKIREKYQYPVIMLTAKGEGIDKITGLTLGADDYITKPFLPLEMVARVKAQLRRY
KHYNSGTQTDDVITYSGLVINTKTHECTLNGKALSLTPTEFSILRILCQKKGEVVSSEEL
FHEIWGDEYFSKSNNTITVHIRHLRKKMDDSFENPKYIKTVWGCGYKIEK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaaaatattgattgtagatgatgagcaggaaattgccgacctggtttctctc
tatttgacgaatgagggatttcaggtgtttaagttctataatgcggctgatgcatggagt
tgtattcagaccgagaacttggatttggcaatcttggatgtaatgctgcctgatatgaat
ggctttgaactttgtcaaaaaatccgtgagaaatatcagtatccagtcatcatgctgaca
gcgaaaggagaaggaatagataaaattaccggccttacccttggggcagacgactacatc
accaaaccctttcttcctttggagatggtggcccgcgttaaagcacagctgagacggtat
aagcattataattcgggaacacaaacagatgatgtcattacctattctggcttagttatc
aataccaaaacgcatgagtgtaccttgaacgggaaagctctatctcttacacctacagag
ttttctattctgcgtatcttatgccagaaaaaaggagaggttgtgagttcggaagaactg
tttcatgaaatatggggagatgaatatttcagcaagagcaacaatacgatcacggtgcat
atccggcatctccgtaaaaaaatggacgattcctttgaaaacccgaaatatataaagact
gtttgggggtgtggatataaaattgaaaagtaa
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