Cytobacillus solani: LIS82_09885
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Entry
LIS82_09885 CDS
T08360
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csoa
Cytobacillus solani
Pathway
csoa01501
beta-Lactam resistance
csoa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csoa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LIS82_09885
01503 Cationic antimicrobial peptide (CAMP) resistance
LIS82_09885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csoa02000
]
LIS82_09885
01504 Antimicrobial resistance genes [BR:
csoa01504
]
LIS82_09885
Transporters [BR:
csoa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LIS82_09885
Antimicrobial resistance genes [BR:
csoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LIS82_09885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
kleA_kleC
TEDC1
Motif
Other DBs
NCBI-ProteinID:
USK56753
LinkDB
All DBs
Position
1867823..1871101
Genome browser
AA seq
1092 aa
AA seq
DB search
MRMSSFSIKRPIFTLVTMFLILILGIVSVLNIPMKLIPDINPPVGVVVATYPGASPDEVV
EKVTKPLEESLATLPGLKTMTSSSQESANFILMQFSWTTDIDEIQNEVIQRLDQAIIPDD
ADRPRFLKFDPSQFPIIQLSLSGENNSQVLRQLADQLKLELTKVEGVASVNLSGTAVKEV
RVELDQGKLKEYGLSQEDIVHTIQANNISLPGDTILTNGKELTTRVISTIDSISTLKNLT
VTVNPMNGQKISLQEVSKVELLNQDDRTITRTNQEPAVLLSVLQQSDANTAAVSKAFKVE
LEKLLDKEKFAGIDYDILFDQGDFIQLAIGNISSSLILGGLFAMVVLFFFLRNVKSPLII
GISIPYSVIFTFVLMFFSNFTLNIMTLGGLALGIGMLVDNAIVVIENIYRHLSMGKDSKE
AALDGAKEVGGAITASTLTTIAVFIPVVFITGIIGELFTSFAMTISFSLFASLIVALTVV
PMLASRLLKAPAANFEAKRQESKVMLMLEKAVKWSLQHRLAVILISLLLFGGGAYGLTTV
GTQFLPNTDEGFFSIRVKLKNGSALTETEKVISALEKELQKEENVETYVSLVGTTQEGSF
RGSRNANIAELYVKMKKVDKRDQTTFEFVDEVKKEIEQAAHKANESTEISFNLQSSAGTS
PNTLTFSVRDVDIDRLNKNVEKIYNELNKLDDTTELSTDLMEKVEEVRITVDREKAMVHG
LLPSQIAMIVNDVTRGNQSTQMIDDNTNIYQVIVEYDRGVTQNLDQLKTLLIKKPDGQFI
PLEEVTVIEQGEGPVSIQRINQQSAVQFTLKYRSSTNLGAISKKVDKVIEDLGLSEETDI
IFSGDRELLESSIDDMFMAFVLAIMFIYLVMAAQFESLKYPFVIMFTVPLMIIGVSIALT
ATRTPIGITAIIGIIVLAGIVVNNAIVIVDYINQKKESGIKTYDAIVISVKDRARPILMT
ALTTILGLIPLALGIGEGTEINQPMGISVIGGLISSTFLTLFVIPVVYSFFDKDTRRLNK
MYATPDGHLIPAYLLEDRTETDKYKEREASKEDSFPVDDPKLGKFSKEDMAIMLEELLKI
VNQDRNNNHEEK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgagcagcttttcgataaaacggccaatttttacattggtgaccatgttctta
attctgattctaggaatagtctctgttttaaatatcccaatgaagcttatacctgatatt
aatccgccggtaggagttgttgtggccacatatcctggtgcaagccctgatgaagtggta
gaaaaggttacgaagcctttggaggaaagcctagcaacacttccaggtttaaaaacaatg
acatcttcatcacaggaaagtgcaaactttattctcatgcagttttcttggacgactgat
attgatgaaattcaaaatgaagtcatccaacgattagatcaagctattataccagatgat
gctgatcgtcctcgcttcctaaaatttgatccttctcagtttcctatcattcaattatct
ttaagtggagaaaataattcacaagttttgagacaattagcagaccagcttaaattagaa
ttgacaaaggtcgaaggtgtagcaagtgttaacctgtctggaacagcggttaaggaagtc
agggtagaactggatcaaggtaaacttaaggaatacgggctcagtcaagaggatatcgta
catacgattcaggccaataatatttcattgcctggagacaccatcttaacgaacggaaaa
gaattaacaacaagggtcattagcacgatcgactcaatttctacattaaaaaacttaaca
gttactgttaatccaatgaatggacaaaaaatatcattgcaagaagttagtaaggttgaa
ttgctaaatcaggatgatcggacaattacaagaacaaaccaagaaccagctgttttgtta
agtgtcctccagcaatctgatgcgaatactgcagcggtctccaaagcatttaaagttgag
cttgaaaaactgctcgataaagaaaaattcgcaggtattgattacgatatattatttgat
caaggtgattttattcagcttgcaattgggaatatctcaagttcacttattctcggggga
ctttttgcgatggttgtacttttcttctttttaagaaacgtaaaaagtccattaattatt
ggaatatcaattccgtattctgtaatttttacttttgtgttaatgtttttttccaacttc
actttaaatattatgactttaggcggtcttgcccttggtataggaatgcttgttgataat
gcaattgttgttatagaaaatatttatcgtcatctatcaatgggaaaagattcgaaggaa
gcagcattagatggagcaaaagaggttggtggtgcgataacggcttcaacacttacgaca
attgctgtgtttatacctgttgtatttattactggaattattggagaactcttcacttcg
tttgcgatgaccatctcctttagtttatttgcttcattaattgtcgctcttacagttgtc
ccaatgcttgccagccgcctattaaaagcaccagctgcaaattttgaagcaaaaaggcaa
gaatcgaaagtaatgctcatgcttgaaaaagcggtaaaatggtcattgcagcatcgttta
gctgttattctcatctcattgctgctttttggtgggggagcgtacgggttaacgacggtt
ggtactcaatttctgcctaatacggatgaaggtttttttagtattcgtgtaaagcttaaa
aatggctctgctctaacagaaacggaaaaagtcatttctgcactggaaaaggaacttcaa
aaggaagagaatgttgaaacatatgtcagtcttgttggtacgacccaggaaggatcattc
aggggatcaaggaatgccaatattgctgaactctacgtaaaaatgaaaaaagtggataaa
cgggatcaaactacttttgaatttgttgatgaggtgaaaaaggagattgaacaggcagca
cataaagcaaatgaaagtactgaaatatcgtttaatctgcaatcttcagctggaacatcg
cctaatacattgacatttagtgttagagatgtcgatatagatcgccttaataaaaatgta
gaaaaaatatacaacgagttaaataaactggatgatacaacggaattatcaacggattta
atggaaaaagtggaagaggtcagaattactgtagatcgtgaaaaagcaatggtacatggg
cttcttccttcacaaatagccatgattgtaaacgatgtgacgaggggaaaccaatcaaca
caaatgattgatgacaatacaaatatttatcaagtaattgtcgagtacgaccgaggagtt
acacaaaatctagaccaattaaaaacactgctgataaaaaagccagatggacagtttata
cctcttgaggaagtaacagtgattgagcaaggggaagggcctgtaagtatccagcgtatt
aatcagcaaagtgctgtacaatttacattgaaatatcgatcttccacaaacttaggagca
atttcaaaaaaggtagataaagtaatagaggatctaggtctatctgaagaaacagatatt
atctttagtggcgatcgtgaattgcttgaatcctcgatagacgatatgttcatggctttt
gtcctagcgatcatgtttatctatctcgtcatggcggcacaattcgaatctttaaaatac
ccatttgttattatgtttacagttccgctaatgattattggtgtttctatcgcattaact
gcgacacgaacgccaatcggaataacagcgattattggcataatcgtactggcaggaatt
gttgtcaataatgcgatagttattgtagattacattaatcagaagaaggagagtggtata
aaaacgtatgatgcaatcgtcatttccgtgaaagatcgcgcaaggccgattctaatgaca
gctttaacgacaatacttggcttaatcccgcttgcgctaggcatcggggaagggacagaa
ataaatcagccaatgggtatttctgtaataggaggattaatcagcagtaccttcttaact
ctatttgttataccagtcgtatacagtttttttgataaagatacgagacgtctgaataaa
atgtatgctacgccagatggtcatctgattccagcctatttacttgaagaccgtactgaa
acggataagtataaagaaagagaagcaagcaaagaggattcgtttcctgttgatgatcca
aagctagggaaatttagcaaggaagatatggcaattatgcttgaagaactgttaaaaata
gtaaatcaagatagaaataataatcatgaggaaaagtaa
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