Cytobacillus spongiae: LS684_06790
Help
Entry
LS684_06790 CDS
T09119
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cspg
Cytobacillus spongiae
Pathway
cspg01501
beta-Lactam resistance
cspg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cspg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LS684_06790
01503 Cationic antimicrobial peptide (CAMP) resistance
LS684_06790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cspg02000
]
LS684_06790
01504 Antimicrobial resistance genes [BR:
cspg01504
]
LS684_06790
Transporters [BR:
cspg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LS684_06790
Antimicrobial resistance genes [BR:
cspg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LS684_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Phage_TAC_4
Motif
Other DBs
NCBI-ProteinID:
UII57142
LinkDB
All DBs
Position
1316899..1320210
Genome browser
AA seq
1103 aa
AA seq
DB search
MKISNFSIRRPIFTLVTMFLVLILGAVSLLNIPLKLIPDINPPVGVVVTSYPGASPDEVV
EKVTKPLEANLATLPGIKTMSTTSQEGANLILLQFSWTTDIDEIQSEVIQRLDQTTLPDD
VQKPRFLKFDPSQFPIIQLSLSSDRDEQSLRELAEQLKLELTKVDGVASVNLSGTTIKEV
RVQLDQDKLKTYNLSQQDVVDVIQANNISMPGNTILTNDKELTTRIISTIDSIDTLKNLT
VTINPSNGEKIKVSDVSDVALTNLDDRTITRTNQEPSVLLSVLQQSDANTAAVSKEFVSQ
LDELLEKDVYEGIESEVLFDQGDYIQQAIGNISNSLLLGGVFAMMVLFFFLKNLKSPLII
GIAIPYSVIFTFVLMYFADFTLNIMTLGGLALGIGMLVDNAIVVIENIYRHLSMGKDPKE
AARDGAKEVGAAITASTLTTIAVFLPVVFITGIIGELFTEFALTISFSLFASLVVALTVV
PMLASRLLKQPKNNIEEKRQTSRPMNLLESSIKWSLRNRAAVIIITIVLLIGGGYGVTTV
GTQFLPNTDEGFFSIRVELGNGVALTETEEVMSAIEKEFEEQDDVDTYVSLIGTTQEGSF
RGSKNANIGELYVKMEDLESRERSTFEFVDDVKGDVERAARKVNDTAEVSFSLQSSSGSA
PNTLTFNVRDTNSNRLNESVNKIYDALIELDDVNELTTDLMDEVEEIQITVDREKALQEG
LAPAQIAMIVNDVTRGNQATQMTAQNANIYGVFVEYDKDITQNLEELKKLLIKKPNGGFV
TLDEVTTIEQGKGPVNIQRINQQDAVQFTLKYKDSTNLGEISKKVDGEIADLDLSEETEI
VFSGDRELLDSSIDDMLMAFVLAIIFIYLVMAAQFESLKYPFVIMFTVPLMVIGVAIALT
VTRTPVSLTAIIGIIVLAGIVVNNAIVIVDYINQKKDEGMRSYDAIVVSVKDRARPILMT
ALTTILGLIPLALGIGEGTEINQPMGITVIGGLISSTFLTLFVIPVVYSFFDKETRRLNK
MYATPDGHLIPAYLLEERIEKHEDEDMKEQKELDAPREEKHELTESTRYSRNDMATMLEE
LLKLVKDNKNDESSDKDKNDSKS
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcagtaatttttccattagaagacccattttcaccttagtgacgatgttttta
gttctaatcttaggtgcggtctcgcttttaaatattccattaaagttgattccggatatt
aatccgcctgttggggtagtcgttacatcctatccgggtgctagccctgatgaagtcgtt
gaaaaagtcacaaagcctttagaggccaatttagctacattgccaggaattaaaacgatg
tctactacttcacaggaaggtgcaaatttaattttattgcagttttcttggacaactgac
attgatgaaatccaaagtgaagtcattcagcgtttagatcaaacaacattgccagatgat
gtacaaaaacctaggtttcttaagtttgacccctcacagtttccgattattcagcttagc
ttgagttcagatcgtgatgagcaatctttaagagaattagcagaacaattaaagttagag
ttaaccaaagtggatggagtagcaagtgttaacctctcaggaactacaataaaagaagtt
cgcgtccaattggatcaagataaattaaaaacctataatttgagccaacaggatgttgtt
gatgttatccaagcaaataatatttccatgcctgggaatacaatcttaacgaatgacaag
gaattaactacgcgtattattagtacgatagattccattgatacattaaagaatttaact
gtaacgattaatccttcaaacggtgagaagatcaaggttagtgatgtaagtgacgttgcc
ctaacaaacctagatgatcgaacaattactcgtacaaaccaagagccatctgtcttactg
agtgttttacagcaatctgacgctaatacagctgctgtatcaaaggaatttgtcagtcaa
ttagatgagttgcttgaaaaggatgtttatgaaggaatcgagtctgaggttctatttgat
caaggggattacattcagcaagcgattggaaatatttcgaactctcttttactaggtgga
gtgtttgcgatgatggtgttgtttttcttcttgaaaaacttgaagagcccattaattatc
gggattgccattccctactcagtcattttcacttttgtccttatgtattttgcagatttc
actttaaatataatgaccttgggtggtctagctcttggaattgggatgcttgtcgataat
gccatcgttgtaatcgaaaatatctatcgccacttatctatgggcaaggatcctaaggaa
gctgcaagagacggtgctaaggaagttggagcagctataacggcttccacattaaccacg
attgccgtatttttacctgtcgtatttattacagggattattggagaattatttacagaa
tttgccctaacgatttcctttagcttatttgcatctttagttgtcgctttaacggttgtc
ccaatgttagcaagtagattgttaaaacagccgaagaataatatagaagaaaaaagacaa
acatctcgcccgatgaatcttcttgaaagctcgattaaatggtcgctccgtaatcgtgca
gcagtcatcatcattacgattgtattgctaattggcggaggatatggggtaacgacagtt
ggaactcaatttttaccgaatacagatgaaggcttttttagcattcgagtagagctagga
aatggtgtcgccttgactgaaacggaagaggttatgtcagcaatagagaaggaatttgaa
gagcaggatgatgttgatacgtatgtaagcttaatcggaacaactcaagaaggttctttt
agaggttcgaagaatgcgaatataggtgagctctatgttaaaatggaggaccttgagagc
cgtgagcgatcaacctttgagtttgtcgatgatgtaaagggagatgtagagagagcagcc
cgaaaagtaaacgatacagcagaagtctcatttagtcttcaatcttcttcaggctcagct
cccaacacattaacctttaatgtaagagatacgaacagcaatcgactaaatgaatcagtg
aataaaatttatgacgctttgattgaattagatgatgtgaatgaattgactactgaccta
atggatgaagtagaagaaattcaaataacagtagaccgtgaaaaagctcttcaagagggg
ctagctccagctcaaattgcaatgatcgtaaatgatgtaacaagaggaaaccaagctaca
caaatgaccgctcaaaacgcaaatatatatggggtttttgtagagtatgataaggatatt
actcaaaatctagaagaactaaaaaaattattaataaaaaagccaaatggtggctttgtg
actcttgacgaggtaacaacaattgaacaaggaaaaggacctgtaaatattcagcgaatt
aaccaacaggacgctgtacaatttacccttaaatacaaggattcaacgaatttgggtgaa
atctcgaaaaaagtagatggagaaattgctgatttagatttatctgaggaaactgagatt
gtctttagtggggatcgagagctacttgattcgtctattgatgatatgttaatggcattt
gttctcgcaattatctttatttacctagttatggctgcacaatttgaatccttaaaatat
ccatttgttattatgtttacagtgccattgatggttattggggttgcgattgccttaacg
gtaacaagaacaccagttagcttaactgcgatcatcggtattattgttcttgcaggaatc
gtcgttaataacgcgattgtgattgtcgactatattaaccagaagaaggatgagggaatg
cgaagctatgatgcgattgtcgtttcagtaaaggaccgtgctcgaccaatccttatgaca
gccctaacgacaatcttaggacttattccattagcgctaggaataggtgaaggtacagag
attaatcaaccgatggggatcactgttatcggtggtttaattagtagtacattcctaaca
ttattcgttattccagttgtatatagctttttcgataaagagacgagaagattaaataag
atgtacgctacacctgatggtcatcttattccagcatatttattagaggaacgcattgag
aaacatgaagatgaagatatgaaagaacagaaagaactagatgcacctcgtgaagagaaa
catgaattaacagaatccactagatacagtcgcaatgatatggcaactatgctagaagag
ttacttaagcttgtaaaagacaataaaaatgatgagtcatctgataaagacaagaacgat
tcaaaatcttaa
DBGET
integrated database retrieval system
